Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pabpc5Q8C7D3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pabpc5Q8C7D3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpc5Q8C7D3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpc5Q8C7D3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.87■■□□□ 1.09
Pabpc5Q8C7D3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpc5Q8C7D3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pabpc5Q8C7D3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpc5Q8C7D3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pabpc5Q8C7D3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Pabpc5Q8C7D3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pabpc5Q8C7D3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpc5Q8C7D3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpc5Q8C7D3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpc5Q8C7D3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpc5Q8C7D3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pabpc5Q8C7D3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pabpc5Q8C7D3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.83■■□□□ 1.09
Pabpc5Q8C7D3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pabpc5Q8C7D3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.82■■□□□ 1.08
Pabpc5Q8C7D3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Pabpc5Q8C7D3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pabpc5Q8C7D3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pabpc5Q8C7D3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pabpc5Q8C7D3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.79■■□□□ 1.08
Pabpc5Q8C7D3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pabpc5Q8C7D3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pabpc5Q8C7D3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pabpc5Q8C7D3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pabpc5Q8C7D3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pabpc5Q8C7D3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pabpc5Q8C7D3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pabpc5Q8C7D3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pabpc5Q8C7D3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Pabpc5Q8C7D3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pabpc5Q8C7D3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpc5Q8C7D3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pabpc5Q8C7D3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.74■■□□□ 1.07
Pabpc5Q8C7D3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pabpc5Q8C7D3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms