Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nop53Q8BK35 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.37■■□□□ 1.33
Nop53Q8BK35 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nop53Q8BK35 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nop53Q8BK35 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.37■■□□□ 1.33
Nop53Q8BK35 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.37■■□□□ 1.33
Nop53Q8BK35 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.36■■□□□ 1.33
Nop53Q8BK35 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Nop53Q8BK35 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Nop53Q8BK35 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nop53Q8BK35 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nop53Q8BK35 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Nop53Q8BK35 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Gm11175-201ENSMUST00000116172 543 ntBASIC23.35■■□□□ 1.33
Nop53Q8BK35 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nop53Q8BK35 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nop53Q8BK35 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nop53Q8BK35 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nop53Q8BK35 Gm45364-201ENSMUST00000210883 159 ntBASIC23.33■■□□□ 1.33
Nop53Q8BK35 Terc-201ENSMUST00000082862 423 ntBASIC23.33■■□□□ 1.33
Nop53Q8BK35 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
Nop53Q8BK35 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Mir6538-201ENSMUST00000183713 110 ntBASIC23.31■■□□□ 1.32
Nop53Q8BK35 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Nop53Q8BK35 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nop53Q8BK35 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.3■■□□□ 1.32
Nop53Q8BK35 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.29■■□□□ 1.32
Nop53Q8BK35 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.29■■□□□ 1.32
Nop53Q8BK35 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nop53Q8BK35 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nop53Q8BK35 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Nop53Q8BK35 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nop53Q8BK35 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Nop53Q8BK35 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Nop53Q8BK35 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nop53Q8BK35 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nop53Q8BK35 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nop53Q8BK35 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nop53Q8BK35 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nop53Q8BK35 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nop53Q8BK35 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nop53Q8BK35 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.26■■□□□ 1.31
Nop53Q8BK35 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Nop53Q8BK35 Gm6311-201ENSMUST00000073790 878 ntBASIC23.26■■□□□ 1.31
Nop53Q8BK35 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nop53Q8BK35 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.26■■□□□ 1.31
Nop53Q8BK35 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nop53Q8BK35 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nop53Q8BK35 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Nop53Q8BK35 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nop53Q8BK35 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nop53Q8BK35 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nop53Q8BK35 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Nop53Q8BK35 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nop53Q8BK35 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nop53Q8BK35 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.22■■□□□ 1.31
Nop53Q8BK35 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nop53Q8BK35 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nop53Q8BK35 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nop53Q8BK35 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nop53Q8BK35 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nop53Q8BK35 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nop53Q8BK35 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Nop53Q8BK35 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nop53Q8BK35 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.21■■□□□ 1.31
Nop53Q8BK35 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nop53Q8BK35 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.21■■□□□ 1.31
Nop53Q8BK35 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nop53Q8BK35 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nop53Q8BK35 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nop53Q8BK35 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nop53Q8BK35 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.2■■□□□ 1.3
Nop53Q8BK35 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.2■■□□□ 1.3
Nop53Q8BK35 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Nop53Q8BK35 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nop53Q8BK35 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nop53Q8BK35 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 212.9 ms