Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.49■□□□□ 0.87
Clrn3Q8BHH8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clrn3Q8BHH8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn3Q8BHH8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn3Q8BHH8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn3Q8BHH8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clrn3Q8BHH8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Clrn3Q8BHH8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clrn3Q8BHH8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Clrn3Q8BHH8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clrn3Q8BHH8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Clrn3Q8BHH8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clrn3Q8BHH8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.47■□□□□ 0.87
Clrn3Q8BHH8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clrn3Q8BHH8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn3Q8BHH8 Mir6538-201ENSMUST00000183713 110 ntBASIC20.45■□□□□ 0.86
Clrn3Q8BHH8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn3Q8BHH8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn3Q8BHH8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clrn3Q8BHH8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Clrn3Q8BHH8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn3Q8BHH8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn3Q8BHH8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn3Q8BHH8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.44■□□□□ 0.86
Clrn3Q8BHH8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clrn3Q8BHH8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clrn3Q8BHH8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn3Q8BHH8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn3Q8BHH8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Clrn3Q8BHH8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn3Q8BHH8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clrn3Q8BHH8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clrn3Q8BHH8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Clrn3Q8BHH8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clrn3Q8BHH8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn3Q8BHH8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clrn3Q8BHH8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn3Q8BHH8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn3Q8BHH8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.39■□□□□ 0.85
Clrn3Q8BHH8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn3Q8BHH8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clrn3Q8BHH8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.38■□□□□ 0.85
Clrn3Q8BHH8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clrn3Q8BHH8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Clrn3Q8BHH8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clrn3Q8BHH8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clrn3Q8BHH8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clrn3Q8BHH8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clrn3Q8BHH8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn3Q8BHH8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn3Q8BHH8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn3Q8BHH8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn3Q8BHH8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clrn3Q8BHH8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clrn3Q8BHH8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Clrn3Q8BHH8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.34■□□□□ 0.85
Clrn3Q8BHH8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Clrn3Q8BHH8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn3Q8BHH8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn3Q8BHH8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn3Q8BHH8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn3Q8BHH8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn3Q8BHH8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms