Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trim62Q80V85 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trim62Q80V85 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.77■■□□□ 1.24
Trim62Q80V85 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Trim62Q80V85 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trim62Q80V85 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim62Q80V85 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim62Q80V85 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim62Q80V85 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim62Q80V85 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim62Q80V85 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.74■■□□□ 1.23
Trim62Q80V85 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim62Q80V85 Gm22567-201ENSMUST00000175542 342 ntBASIC22.74■■□□□ 1.23
Trim62Q80V85 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim62Q80V85 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim62Q80V85 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Trim62Q80V85 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim62Q80V85 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim62Q80V85 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim62Q80V85 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim62Q80V85 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Trim62Q80V85 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim62Q80V85 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim62Q80V85 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim62Q80V85 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Trim62Q80V85 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim62Q80V85 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.71■■□□□ 1.23
Trim62Q80V85 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.7■■□□□ 1.22
Trim62Q80V85 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim62Q80V85 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Trim62Q80V85 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim62Q80V85 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.69■■□□□ 1.22
Trim62Q80V85 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim62Q80V85 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim62Q80V85 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.69■■□□□ 1.22
Trim62Q80V85 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim62Q80V85 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.69■■□□□ 1.22
Trim62Q80V85 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Trim62Q80V85 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim62Q80V85 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim62Q80V85 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim62Q80V85 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.68■■□□□ 1.22
Trim62Q80V85 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.67■■□□□ 1.22
Trim62Q80V85 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim62Q80V85 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim62Q80V85 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim62Q80V85 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim62Q80V85 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim62Q80V85 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Trim62Q80V85 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.66■■□□□ 1.22
Trim62Q80V85 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim62Q80V85 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim62Q80V85 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim62Q80V85 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim62Q80V85 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Trim62Q80V85 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.65■■□□□ 1.22
Trim62Q80V85 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.65■■□□□ 1.22
Trim62Q80V85 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim62Q80V85 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim62Q80V85 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim62Q80V85 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Trim62Q80V85 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim62Q80V85 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim62Q80V85 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.64■■□□□ 1.21
Trim62Q80V85 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim62Q80V85 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Trim62Q80V85 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim62Q80V85 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim62Q80V85 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim62Q80V85 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim62Q80V85 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim62Q80V85 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim62Q80V85 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.62■■□□□ 1.21
Trim62Q80V85 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim62Q80V85 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim62Q80V85 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim62Q80V85 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trim62Q80V85 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim62Q80V85 Gm5921-201ENSMUST00000075898 882 ntBASIC22.61■■□□□ 1.21
Trim62Q80V85 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim62Q80V85 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Trim62Q80V85 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Trim62Q80V85 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.61■■□□□ 1.21
Trim62Q80V85 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms