Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp8Q80U87 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp8Q80U87 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Usp8Q80U87 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.82■■□□□ 1.08
Usp8Q80U87 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Usp8Q80U87 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Usp8Q80U87 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Usp8Q80U87 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Usp8Q80U87 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.81■■□□□ 1.08
Usp8Q80U87 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Usp8Q80U87 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Usp8Q80U87 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.8■■□□□ 1.08
Usp8Q80U87 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Usp8Q80U87 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.8■■□□□ 1.08
Usp8Q80U87 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp8Q80U87 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.8■■□□□ 1.08
Usp8Q80U87 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.79■■□□□ 1.08
Usp8Q80U87 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp8Q80U87 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.78■■□□□ 1.08
Usp8Q80U87 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp8Q80U87 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp8Q80U87 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Usp8Q80U87 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Usp8Q80U87 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp8Q80U87 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp8Q80U87 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Usp8Q80U87 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp8Q80U87 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.75■■□□□ 1.07
Usp8Q80U87 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp8Q80U87 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp8Q80U87 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Usp8Q80U87 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp8Q80U87 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Usp8Q80U87 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp8Q80U87 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp8Q80U87 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Usp8Q80U87 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp8Q80U87 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp8Q80U87 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.73■■□□□ 1.07
Usp8Q80U87 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp8Q80U87 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp8Q80U87 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp8Q80U87 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp8Q80U87 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Usp8Q80U87 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.72■■□□□ 1.07
Usp8Q80U87 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp8Q80U87 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp8Q80U87 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp8Q80U87 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.72■■□□□ 1.07
Usp8Q80U87 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp8Q80U87 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp8Q80U87 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp8Q80U87 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp8Q80U87 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp8Q80U87 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp8Q80U87 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Usp8Q80U87 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Usp8Q80U87 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp8Q80U87 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Usp8Q80U87 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.7■■□□□ 1.07
Usp8Q80U87 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Usp8Q80U87 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp8Q80U87 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp8Q80U87 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Usp8Q80U87 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp8Q80U87 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp8Q80U87 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Usp8Q80U87 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp8Q80U87 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp8Q80U87 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.7■■□□□ 1.06
Usp8Q80U87 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp8Q80U87 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.69■■□□□ 1.06
Usp8Q80U87 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Usp8Q80U87 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.69■■□□□ 1.06
Usp8Q80U87 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.69■■□□□ 1.06
Usp8Q80U87 Gm6311-201ENSMUST00000073790 878 ntBASIC21.69■■□□□ 1.06
Usp8Q80U87 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp8Q80U87 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Usp8Q80U87 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp8Q80U87 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp8Q80U87 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.68■■□□□ 1.06
Usp8Q80U87 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Usp8Q80U87 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp8Q80U87 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.68■■□□□ 1.06
Usp8Q80U87 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp8Q80U87 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp8Q80U87 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms