Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.23■□□□□ 0.83
Pif1Q80SX8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pif1Q80SX8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pif1Q80SX8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.22■□□□□ 0.83
Pif1Q80SX8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pif1Q80SX8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pif1Q80SX8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pif1Q80SX8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pif1Q80SX8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.21■□□□□ 0.83
Pif1Q80SX8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pif1Q80SX8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Pif1Q80SX8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.2■□□□□ 0.82
Pif1Q80SX8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pif1Q80SX8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.2■□□□□ 0.82
Pif1Q80SX8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pif1Q80SX8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pif1Q80SX8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pif1Q80SX8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pif1Q80SX8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pif1Q80SX8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.18■□□□□ 0.82
Pif1Q80SX8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pif1Q80SX8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pif1Q80SX8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pif1Q80SX8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Pif1Q80SX8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pif1Q80SX8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pif1Q80SX8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.17■□□□□ 0.82
Pif1Q80SX8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pif1Q80SX8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pif1Q80SX8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pif1Q80SX8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Etf1-202ENSMUST00000180351 108 ntBASIC20.16■□□□□ 0.82
Pif1Q80SX8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pif1Q80SX8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pif1Q80SX8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pif1Q80SX8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pif1Q80SX8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Pif1Q80SX8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pif1Q80SX8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pif1Q80SX8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pif1Q80SX8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pif1Q80SX8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pif1Q80SX8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pif1Q80SX8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pif1Q80SX8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pif1Q80SX8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pif1Q80SX8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.12■□□□□ 0.81
Pif1Q80SX8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pif1Q80SX8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pif1Q80SX8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.1■□□□□ 0.81
Pif1Q80SX8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pif1Q80SX8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pif1Q80SX8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pif1Q80SX8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pif1Q80SX8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.09■□□□□ 0.81
Pif1Q80SX8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pif1Q80SX8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pif1Q80SX8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pif1Q80SX8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.08■□□□□ 0.81
Pif1Q80SX8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pif1Q80SX8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Pif1Q80SX8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pif1Q80SX8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pif1Q80SX8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pif1Q80SX8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pif1Q80SX8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pif1Q80SX8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pif1Q80SX8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pif1Q80SX8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pif1Q80SX8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pif1Q80SX8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms