Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.88■□□□□ 0.13
Foxc1Q61572 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxc1Q61572 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxc1Q61572 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Foxc1Q61572 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.87■□□□□ 0.13
Foxc1Q61572 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Foxc1Q61572 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Foxc1Q61572 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.86■□□□□ 0.13
Foxc1Q61572 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.86■□□□□ 0.13
Foxc1Q61572 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Foxc1Q61572 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Foxc1Q61572 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Foxc1Q61572 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.85■□□□□ 0.13
Foxc1Q61572 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Foxc1Q61572 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Foxc1Q61572 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.85■□□□□ 0.13
Foxc1Q61572 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Foxc1Q61572 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Foxc1Q61572 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.84■□□□□ 0.13
Foxc1Q61572 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.84■□□□□ 0.13
Foxc1Q61572 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.84■□□□□ 0.13
Foxc1Q61572 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Foxc1Q61572 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.84■□□□□ 0.13
Foxc1Q61572 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.84■□□□□ 0.13
Foxc1Q61572 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.84■□□□□ 0.13
Foxc1Q61572 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Foxc1Q61572 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Foxc1Q61572 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.83■□□□□ 0.13
Foxc1Q61572 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Foxc1Q61572 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Foxc1Q61572 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Foxc1Q61572 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.83■□□□□ 0.12
Foxc1Q61572 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Foxc1Q61572 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Foxc1Q61572 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxc1Q61572 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxc1Q61572 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Foxc1Q61572 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxc1Q61572 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxc1Q61572 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Foxc1Q61572 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Foxc1Q61572 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Foxc1Q61572 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Foxc1Q61572 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Foxc1Q61572 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Foxc1Q61572 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Foxc1Q61572 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Foxc1Q61572 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.8■□□□□ 0.12
Foxc1Q61572 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.8■□□□□ 0.12
Foxc1Q61572 Gm10420-201ENSMUST00000121713 882 ntBASIC15.8■□□□□ 0.12
Foxc1Q61572 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Foxc1Q61572 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxc1Q61572 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Foxc1Q61572 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Foxc1Q61572 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxc1Q61572 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Foxc1Q61572 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxc1Q61572 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxc1Q61572 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Foxc1Q61572 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxc1Q61572 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxc1Q61572 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxc1Q61572 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxc1Q61572 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxc1Q61572 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Foxc1Q61572 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms