Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
Trpc1Q61056 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trpc1Q61056 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpc1Q61056 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.19■□□□□ 0.98
Trpc1Q61056 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.19■□□□□ 0.98
Trpc1Q61056 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpc1Q61056 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.19■□□□□ 0.98
Trpc1Q61056 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.19■□□□□ 0.98
Trpc1Q61056 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.19■□□□□ 0.98
Trpc1Q61056 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.19■□□□□ 0.98
Trpc1Q61056 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trpc1Q61056 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.19■□□□□ 0.98
Trpc1Q61056 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpc1Q61056 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trpc1Q61056 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpc1Q61056 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpc1Q61056 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trpc1Q61056 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpc1Q61056 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trpc1Q61056 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trpc1Q61056 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trpc1Q61056 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trpc1Q61056 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trpc1Q61056 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trpc1Q61056 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.15■□□□□ 0.98
Trpc1Q61056 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.15■□□□□ 0.98
Trpc1Q61056 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.15■□□□□ 0.98
Trpc1Q61056 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Trpc1Q61056 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trpc1Q61056 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trpc1Q61056 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trpc1Q61056 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trpc1Q61056 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.13■□□□□ 0.97
Trpc1Q61056 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trpc1Q61056 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Trpc1Q61056 Gm4799-201ENSMUST00000095396 657 ntBASIC21.13■□□□□ 0.97
Trpc1Q61056 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trpc1Q61056 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trpc1Q61056 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trpc1Q61056 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trpc1Q61056 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trpc1Q61056 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trpc1Q61056 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trpc1Q61056 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.12■□□□□ 0.97
Trpc1Q61056 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trpc1Q61056 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trpc1Q61056 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trpc1Q61056 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trpc1Q61056 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trpc1Q61056 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.11■□□□□ 0.97
Trpc1Q61056 Gm9812-201ENSMUST00000061934 968 ntBASIC21.11■□□□□ 0.97
Trpc1Q61056 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trpc1Q61056 Gm6311-201ENSMUST00000073790 878 ntBASIC21.11■□□□□ 0.97
Trpc1Q61056 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trpc1Q61056 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.11■□□□□ 0.97
Trpc1Q61056 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.11■□□□□ 0.97
Trpc1Q61056 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trpc1Q61056 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.1■□□□□ 0.97
Trpc1Q61056 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trpc1Q61056 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trpc1Q61056 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trpc1Q61056 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trpc1Q61056 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trpc1Q61056 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trpc1Q61056 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trpc1Q61056 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.09■□□□□ 0.97
Trpc1Q61056 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Trpc1Q61056 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trpc1Q61056 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trpc1Q61056 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trpc1Q61056 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.08■□□□□ 0.97
Trpc1Q61056 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Trpc1Q61056 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trpc1Q61056 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trpc1Q61056 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trpc1Q61056 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trpc1Q61056 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trpc1Q61056 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trpc1Q61056 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trpc1Q61056 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trpc1Q61056 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trpc1Q61056 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.06■□□□□ 0.96
Trpc1Q61056 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trpc1Q61056 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.06■□□□□ 0.96
Trpc1Q61056 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.06■□□□□ 0.96
Trpc1Q61056 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.06■□□□□ 0.96
Trpc1Q61056 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trpc1Q61056 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.05■□□□□ 0.96
Trpc1Q61056 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.05■□□□□ 0.96
Trpc1Q61056 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trpc1Q61056 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trpc1Q61056 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.05■□□□□ 0.96
Trpc1Q61056 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Trpc1Q61056 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms