Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cdkl5Q3UTQ8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Cdkl5Q3UTQ8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.41■■□□□ 1.66
Cdkl5Q3UTQ8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cdkl5Q3UTQ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cdkl5Q3UTQ8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cdkl5Q3UTQ8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.39■■□□□ 1.66
Cdkl5Q3UTQ8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Cdkl5Q3UTQ8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cdkl5Q3UTQ8 Mir6538-201ENSMUST00000183713 110 ntBASIC25.39■■□□□ 1.66
Cdkl5Q3UTQ8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Cdkl5Q3UTQ8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cdkl5Q3UTQ8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.39■■□□□ 1.65
Cdkl5Q3UTQ8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cdkl5Q3UTQ8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.37■■□□□ 1.65
Cdkl5Q3UTQ8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cdkl5Q3UTQ8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cdkl5Q3UTQ8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cdkl5Q3UTQ8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.36■■□□□ 1.65
Cdkl5Q3UTQ8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cdkl5Q3UTQ8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cdkl5Q3UTQ8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Cdkl5Q3UTQ8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cdkl5Q3UTQ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Cdkl5Q3UTQ8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.34■■□□□ 1.65
Cdkl5Q3UTQ8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cdkl5Q3UTQ8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Gm27502-201ENSMUST00000183495 199 ntBASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25.33■■□□□ 1.65
Cdkl5Q3UTQ8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Cdkl5Q3UTQ8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Gm14523-201ENSMUST00000117260 558 ntBASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cdkl5Q3UTQ8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cdkl5Q3UTQ8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cdkl5Q3UTQ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdkl5Q3UTQ8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdkl5Q3UTQ8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdkl5Q3UTQ8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdkl5Q3UTQ8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cdkl5Q3UTQ8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cdkl5Q3UTQ8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cdkl5Q3UTQ8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Cdkl5Q3UTQ8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cdkl5Q3UTQ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cdkl5Q3UTQ8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cdkl5Q3UTQ8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cdkl5Q3UTQ8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cdkl5Q3UTQ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.26■■□□□ 1.63
Cdkl5Q3UTQ8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.26■■□□□ 1.63
Cdkl5Q3UTQ8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cdkl5Q3UTQ8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cdkl5Q3UTQ8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Gm7332-201ENSMUST00000118351 454 ntBASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Cdkl5Q3UTQ8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cdkl5Q3UTQ8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cdkl5Q3UTQ8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cdkl5Q3UTQ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.24■■□□□ 1.63
Cdkl5Q3UTQ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cdkl5Q3UTQ8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.23■■□□□ 1.63
Cdkl5Q3UTQ8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Cdkl5Q3UTQ8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Cdkl5Q3UTQ8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms