Protein–RNA interactions for Protein: Q3UQ97

Gm5460, Predicted gene 5460, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5460Q3UQ97 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.27■■□□□ 1
Gm5460Q3UQ97 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Gm5460Q3UQ97 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5460Q3UQ97 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5460Q3UQ97 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5460Q3UQ97 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5460Q3UQ97 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Gm5460Q3UQ97 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5460Q3UQ97 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5460Q3UQ97 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5460Q3UQ97 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5460Q3UQ97 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5460Q3UQ97 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5460Q3UQ97 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5460Q3UQ97 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5460Q3UQ97 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5460Q3UQ97 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5460Q3UQ97 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm5460Q3UQ97 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5460Q3UQ97 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5460Q3UQ97 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5460Q3UQ97 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Gm5460Q3UQ97 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5460Q3UQ97 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5460Q3UQ97 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5460Q3UQ97 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Gm5460Q3UQ97 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5460Q3UQ97 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5460Q3UQ97 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5460Q3UQ97 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5460Q3UQ97 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm5460Q3UQ97 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5460Q3UQ97 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Gm5460Q3UQ97 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.17■□□□□ 0.98
Gm5460Q3UQ97 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5460Q3UQ97 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5460Q3UQ97 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.17■□□□□ 0.98
Gm5460Q3UQ97 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm5460Q3UQ97 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5460Q3UQ97 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5460Q3UQ97 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5460Q3UQ97 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.15■□□□□ 0.98
Gm5460Q3UQ97 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5460Q3UQ97 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5460Q3UQ97 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5460Q3UQ97 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm5460Q3UQ97 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Gm5460Q3UQ97 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5460Q3UQ97 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5460Q3UQ97 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm5460Q3UQ97 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5460Q3UQ97 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gm5460Q3UQ97 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5460Q3UQ97 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5460Q3UQ97 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5460Q3UQ97 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gm5460Q3UQ97 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.11■□□□□ 0.97
Gm5460Q3UQ97 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm5460Q3UQ97 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm5460Q3UQ97 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm5460Q3UQ97 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm5460Q3UQ97 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm5460Q3UQ97 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms