Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx3-2P97503 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nkx3-2P97503 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx3-2P97503 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Nkx3-2P97503 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nkx3-2P97503 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nkx3-2P97503 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx3-2P97503 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nkx3-2P97503 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.6■□□□□ 0.89
Nkx3-2P97503 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx3-2P97503 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Gm43566-201ENSMUST00000196851 808 ntBASIC20.59■□□□□ 0.89
Nkx3-2P97503 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx3-2P97503 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nkx3-2P97503 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx3-2P97503 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx3-2P97503 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx3-2P97503 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Nkx3-2P97503 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx3-2P97503 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nkx3-2P97503 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Gm45444-201ENSMUST00000211394 898 ntBASIC20.56■□□□□ 0.88
Nkx3-2P97503 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx3-2P97503 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.55■□□□□ 0.88
Nkx3-2P97503 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx3-2P97503 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx3-2P97503 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.54■□□□□ 0.88
Nkx3-2P97503 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx3-2P97503 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx3-2P97503 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx3-2P97503 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx3-2P97503 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx3-2P97503 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx3-2P97503 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.53■□□□□ 0.88
Nkx3-2P97503 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx3-2P97503 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nkx3-2P97503 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx3-2P97503 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx3-2P97503 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx3-2P97503 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx3-2P97503 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx3-2P97503 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx3-2P97503 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx3-2P97503 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx3-2P97503 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx3-2P97503 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nkx3-2P97503 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Nkx3-2P97503 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx3-2P97503 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx3-2P97503 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx3-2P97503 Gm13238-201ENSMUST00000117655 780 ntBASIC20.48■□□□□ 0.87
Nkx3-2P97503 Gm15546-201ENSMUST00000122095 826 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms