Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn18P56857 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cldn18P56857 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn18P56857 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn18P56857 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn18P56857 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn18P56857 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn18P56857 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cldn18P56857 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn18P56857 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn18P56857 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cldn18P56857 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn18P56857 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn18P56857 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn18P56857 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn18P56857 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn18P56857 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.7■□□□□ 0.74
Cldn18P56857 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.7■□□□□ 0.74
Cldn18P56857 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn18P56857 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn18P56857 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.69■□□□□ 0.74
Cldn18P56857 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn18P56857 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn18P56857 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.69■□□□□ 0.74
Cldn18P56857 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn18P56857 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn18P56857 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn18P56857 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn18P56857 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn18P56857 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn18P56857 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn18P56857 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn18P56857 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn18P56857 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.67■□□□□ 0.74
Cldn18P56857 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn18P56857 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn18P56857 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cldn18P56857 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cldn18P56857 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn18P56857 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn18P56857 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn18P56857 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cldn18P56857 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cldn18P56857 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cldn18P56857 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn18P56857 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn18P56857 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Cldn18P56857 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Cldn18P56857 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.64■□□□□ 0.73
Cldn18P56857 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn18P56857 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn18P56857 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldn18P56857 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn18P56857 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn18P56857 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cldn18P56857 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn18P56857 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.62■□□□□ 0.73
Cldn18P56857 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn18P56857 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn18P56857 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn18P56857 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldn18P56857 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn18P56857 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cldn18P56857 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn18P56857 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn18P56857 Gm22567-201ENSMUST00000175542 342 ntBASIC19.61■□□□□ 0.73
Cldn18P56857 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn18P56857 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn18P56857 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn18P56857 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn18P56857 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.6■□□□□ 0.73
Cldn18P56857 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn18P56857 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.6■□□□□ 0.73
Cldn18P56857 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.59■□□□□ 0.73
Cldn18P56857 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn18P56857 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn18P56857 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn18P56857 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn18P56857 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn18P56857 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn18P56857 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.59■□□□□ 0.73
Cldn18P56857 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.59■□□□□ 0.73
Cldn18P56857 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cldn18P56857 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn18P56857 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.58■□□□□ 0.72
Cldn18P56857 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn18P56857 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn18P56857 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn18P56857 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn18P56857 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn18P56857 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.58■□□□□ 0.72
Cldn18P56857 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn18P56857 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cldn18P56857 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms