Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga2P52927 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga2P52927 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga2P52927 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmga2P52927 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga2P52927 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.68■□□□□ 0.58
Hmga2P52927 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.68■□□□□ 0.58
Hmga2P52927 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga2P52927 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmga2P52927 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga2P52927 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.67■□□□□ 0.58
Hmga2P52927 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hmga2P52927 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga2P52927 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga2P52927 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga2P52927 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Hmga2P52927 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga2P52927 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hmga2P52927 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga2P52927 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga2P52927 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.66■□□□□ 0.58
Hmga2P52927 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.65■□□□□ 0.58
Hmga2P52927 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga2P52927 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
Hmga2P52927 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga2P52927 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hmga2P52927 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga2P52927 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga2P52927 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga2P52927 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hmga2P52927 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.63■□□□□ 0.57
Hmga2P52927 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.63■□□□□ 0.57
Hmga2P52927 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga2P52927 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Hmga2P52927 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.63■□□□□ 0.57
Hmga2P52927 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga2P52927 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga2P52927 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga2P52927 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.62■□□□□ 0.57
Hmga2P52927 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hmga2P52927 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.62■□□□□ 0.57
Hmga2P52927 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.62■□□□□ 0.57
Hmga2P52927 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.62■□□□□ 0.57
Hmga2P52927 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga2P52927 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hmga2P52927 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga2P52927 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga2P52927 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga2P52927 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga2P52927 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga2P52927 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.61■□□□□ 0.57
Hmga2P52927 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga2P52927 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Hmga2P52927 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.61■□□□□ 0.57
Hmga2P52927 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga2P52927 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hmga2P52927 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmga2P52927 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga2P52927 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga2P52927 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga2P52927 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Hmga2P52927 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga2P52927 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga2P52927 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmga2P52927 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hmga2P52927 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga2P52927 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmga2P52927 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmga2P52927 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.58■□□□□ 0.56
Hmga2P52927 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.58■□□□□ 0.56
Hmga2P52927 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmga2P52927 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmga2P52927 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.58■□□□□ 0.56
Hmga2P52927 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmga2P52927 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Hmga2P52927 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hmga2P52927 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Gm9812-201ENSMUST00000061934 968 ntBASIC18.57■□□□□ 0.56
Hmga2P52927 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hmga2P52927 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hmga2P52927 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga2P52927 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms