Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.69■□□□□ 0.42
Cd27P41272 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cd27P41272 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.69■□□□□ 0.42
Cd27P41272 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd27P41272 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd27P41272 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd27P41272 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cd27P41272 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd27P41272 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd27P41272 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd27P41272 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.67■□□□□ 0.42
Cd27P41272 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd27P41272 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd27P41272 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd27P41272 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd27P41272 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd27P41272 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cd27P41272 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd27P41272 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd27P41272 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.66■□□□□ 0.42
Cd27P41272 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd27P41272 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cd27P41272 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.65■□□□□ 0.42
Cd27P41272 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd27P41272 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd27P41272 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd27P41272 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd27P41272 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cd27P41272 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cd27P41272 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd27P41272 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd27P41272 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cd27P41272 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd27P41272 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cd27P41272 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cd27P41272 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.63■□□□□ 0.41
Cd27P41272 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd27P41272 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd27P41272 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd27P41272 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd27P41272 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd27P41272 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd27P41272 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd27P41272 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd27P41272 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd27P41272 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd27P41272 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd27P41272 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd27P41272 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd27P41272 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd27P41272 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd27P41272 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd27P41272 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cd27P41272 Gm10420-201ENSMUST00000121713 882 ntBASIC17.6■□□□□ 0.41
Cd27P41272 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd27P41272 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd27P41272 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd27P41272 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cd27P41272 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cd27P41272 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cd27P41272 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd27P41272 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.58■□□□□ 0.4
Cd27P41272 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd27P41272 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd27P41272 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd27P41272 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd27P41272 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd27P41272 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd27P41272 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd27P41272 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd27P41272 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd27P41272 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd27P41272 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd27P41272 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
Cd27P41272 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd27P41272 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd27P41272 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd27P41272 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd27P41272 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd27P41272 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd27P41272 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms