Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca1P41233 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.07■□□□□ 0.48
Abca1P41233 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Abca1P41233 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca1P41233 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abca1P41233 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca1P41233 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.07■□□□□ 0.48
Abca1P41233 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca1P41233 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Abca1P41233 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca1P41233 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abca1P41233 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Abca1P41233 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Abca1P41233 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca1P41233 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abca1P41233 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Abca1P41233 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Abca1P41233 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Abca1P41233 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Abca1P41233 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Abca1P41233 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca1P41233 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca1P41233 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Abca1P41233 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca1P41233 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca1P41233 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca1P41233 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca1P41233 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca1P41233 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Abca1P41233 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca1P41233 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca1P41233 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca1P41233 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.02■□□□□ 0.47
Abca1P41233 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.02■□□□□ 0.47
Abca1P41233 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.01■□□□□ 0.47
Abca1P41233 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Abca1P41233 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
Abca1P41233 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18■□□□□ 0.47
Abca1P41233 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18■□□□□ 0.47
Abca1P41233 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abca1P41233 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18■□□□□ 0.47
Abca1P41233 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Etf1-202ENSMUST00000180351 108 ntBASIC17.99■□□□□ 0.47
Abca1P41233 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca1P41233 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Abca1P41233 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.98■□□□□ 0.47
Abca1P41233 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Abca1P41233 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Abca1P41233 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca1P41233 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abca1P41233 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca1P41233 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca1P41233 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.96■□□□□ 0.47
Abca1P41233 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.96■□□□□ 0.47
Abca1P41233 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.96■□□□□ 0.47
Abca1P41233 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca1P41233 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca1P41233 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca1P41233 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.96■□□□□ 0.47
Abca1P41233 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abca1P41233 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Abca1P41233 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Abca1P41233 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abca1P41233 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms