Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox6P40645 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox6P40645 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox6P40645 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox6P40645 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox6P40645 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox6P40645 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox6P40645 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox6P40645 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.42■□□□□ 0.86
Sox6P40645 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.42■□□□□ 0.86
Sox6P40645 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sox6P40645 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Sox6P40645 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox6P40645 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sox6P40645 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.41■□□□□ 0.86
Sox6P40645 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sox6P40645 Gm45364-201ENSMUST00000210883 159 ntBASIC20.41■□□□□ 0.86
Sox6P40645 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.41■□□□□ 0.86
Sox6P40645 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox6P40645 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox6P40645 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox6P40645 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox6P40645 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox6P40645 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox6P40645 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.4■□□□□ 0.86
Sox6P40645 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox6P40645 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox6P40645 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sox6P40645 Gm9812-201ENSMUST00000061934 968 ntBASIC20.39■□□□□ 0.85
Sox6P40645 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sox6P40645 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox6P40645 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sox6P40645 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sox6P40645 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox6P40645 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sox6P40645 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Sox6P40645 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox6P40645 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox6P40645 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox6P40645 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox6P40645 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox6P40645 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.36■□□□□ 0.85
Sox6P40645 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sox6P40645 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox6P40645 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox6P40645 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sox6P40645 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.36■□□□□ 0.85
Sox6P40645 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox6P40645 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sox6P40645 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sox6P40645 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox6P40645 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox6P40645 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.35■□□□□ 0.85
Sox6P40645 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox6P40645 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox6P40645 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox6P40645 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox6P40645 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.35■□□□□ 0.85
Sox6P40645 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox6P40645 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox6P40645 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.34■□□□□ 0.85
Sox6P40645 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox6P40645 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sox6P40645 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sox6P40645 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.33■□□□□ 0.85
Sox6P40645 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox6P40645 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox6P40645 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox6P40645 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.32■□□□□ 0.84
Sox6P40645 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox6P40645 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox6P40645 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox6P40645 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Sox6P40645 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox6P40645 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sox6P40645 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox6P40645 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Sox6P40645 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sox6P40645 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox6P40645 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox6P40645 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox6P40645 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox6P40645 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox6P40645 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox6P40645 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox6P40645 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
Sox6P40645 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.29■□□□□ 0.84
Sox6P40645 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox6P40645 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox6P40645 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox6P40645 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.28■□□□□ 0.84
Sox6P40645 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms