Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh4P39038 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cdh4P39038 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cdh4P39038 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cdh4P39038 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Cdh4P39038 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh4P39038 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cdh4P39038 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh4P39038 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh4P39038 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh4P39038 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cdh4P39038 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh4P39038 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh4P39038 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.9■□□□□ 0.94
Cdh4P39038 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh4P39038 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh4P39038 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh4P39038 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh4P39038 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh4P39038 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdh4P39038 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh4P39038 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdh4P39038 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh4P39038 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Cdh4P39038 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.88■□□□□ 0.93
Cdh4P39038 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cdh4P39038 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh4P39038 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh4P39038 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh4P39038 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh4P39038 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh4P39038 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh4P39038 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh4P39038 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.86■□□□□ 0.93
Cdh4P39038 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh4P39038 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cdh4P39038 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh4P39038 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh4P39038 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh4P39038 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh4P39038 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh4P39038 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh4P39038 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh4P39038 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.85■□□□□ 0.93
Cdh4P39038 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdh4P39038 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.85■□□□□ 0.93
Cdh4P39038 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.84■□□□□ 0.93
Cdh4P39038 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh4P39038 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.84■□□□□ 0.93
Cdh4P39038 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh4P39038 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh4P39038 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh4P39038 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh4P39038 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.83■□□□□ 0.93
Cdh4P39038 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh4P39038 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh4P39038 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh4P39038 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cdh4P39038 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh4P39038 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh4P39038 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh4P39038 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh4P39038 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cdh4P39038 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh4P39038 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh4P39038 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh4P39038 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cdh4P39038 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh4P39038 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh4P39038 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh4P39038 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdh4P39038 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh4P39038 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh4P39038 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Cdh4P39038 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cdh4P39038 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh4P39038 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.78■□□□□ 0.92
Cdh4P39038 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh4P39038 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh4P39038 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Cdh4P39038 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms