Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Foxa1P35582 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Foxa1P35582 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxa1P35582 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxa1P35582 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Foxa1P35582 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxa1P35582 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa1P35582 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa1P35582 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa1P35582 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Foxa1P35582 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxa1P35582 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Foxa1P35582 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxa1P35582 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Foxa1P35582 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxa1P35582 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxa1P35582 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxa1P35582 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxa1P35582 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxa1P35582 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.27■□□□□ 0.84
Foxa1P35582 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxa1P35582 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxa1P35582 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxa1P35582 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Foxa1P35582 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa1P35582 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa1P35582 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.26■□□□□ 0.83
Foxa1P35582 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Foxa1P35582 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa1P35582 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxa1P35582 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa1P35582 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa1P35582 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa1P35582 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Foxa1P35582 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa1P35582 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxa1P35582 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.24■□□□□ 0.83
Foxa1P35582 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.24■□□□□ 0.83
Foxa1P35582 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxa1P35582 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxa1P35582 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxa1P35582 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxa1P35582 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 Gm10420-201ENSMUST00000121713 882 ntBASIC20.22■□□□□ 0.83
Foxa1P35582 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.22■□□□□ 0.83
Foxa1P35582 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxa1P35582 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa1P35582 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.21■□□□□ 0.83
Foxa1P35582 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa1P35582 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Foxa1P35582 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa1P35582 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Foxa1P35582 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa1P35582 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxa1P35582 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Foxa1P35582 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa1P35582 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa1P35582 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxa1P35582 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Foxa1P35582 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa1P35582 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa1P35582 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.19■□□□□ 0.82
Foxa1P35582 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Foxa1P35582 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxa1P35582 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.19■□□□□ 0.82
Foxa1P35582 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa1P35582 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa1P35582 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa1P35582 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa1P35582 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
Foxa1P35582 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxa1P35582 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa1P35582 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Foxa1P35582 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa1P35582 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa1P35582 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa1P35582 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa1P35582 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxa1P35582 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Foxa1P35582 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.16■□□□□ 0.82
Foxa1P35582 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Foxa1P35582 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxa1P35582 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms