Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hoxb2P0C1T1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Gm45444-201ENSMUST00000211394 898 ntBASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxb2P0C1T1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Gm43566-201ENSMUST00000196851 808 ntBASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxb2P0C1T1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb2P0C1T1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb2P0C1T1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxb2P0C1T1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.08■□□□□ 0.64
Hoxb2P0C1T1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
Hoxb2P0C1T1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxb2P0C1T1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxb2P0C1T1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxb2P0C1T1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Hoxb2P0C1T1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hoxb2P0C1T1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Hoxb2P0C1T1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxb2P0C1T1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxb2P0C1T1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.06■□□□□ 0.64
Hoxb2P0C1T1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxb2P0C1T1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Hoxb2P0C1T1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxb2P0C1T1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxb2P0C1T1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxb2P0C1T1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxb2P0C1T1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxb2P0C1T1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxb2P0C1T1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxb2P0C1T1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxb2P0C1T1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.02■□□□□ 0.64
Hoxb2P0C1T1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxb2P0C1T1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxb2P0C1T1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxb2P0C1T1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hoxb2P0C1T1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxb2P0C1T1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hoxb2P0C1T1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxb2P0C1T1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
Hoxb2P0C1T1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.01■□□□□ 0.63
Hoxb2P0C1T1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxb2P0C1T1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxb2P0C1T1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxb2P0C1T1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxb2P0C1T1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxb2P0C1T1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxb2P0C1T1 Gm28731-201ENSMUST00000185564 1569 ntBASIC19■□□□□ 0.63
Hoxb2P0C1T1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19■□□□□ 0.63
Hoxb2P0C1T1 Gm6934-201ENSMUST00000194780 1905 ntBASIC19■□□□□ 0.63
Hoxb2P0C1T1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxb2P0C1T1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxb2P0C1T1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxb2P0C1T1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms