Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC32.65■■■□□ 2.82
NclP09405 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NclP09405 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC32.64■■■□□ 2.82
NclP09405 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
NclP09405 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
NclP09405 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
NclP09405 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
NclP09405 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC32.62■■■□□ 2.81
NclP09405 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.62■■■□□ 2.81
NclP09405 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
NclP09405 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NclP09405 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
NclP09405 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
NclP09405 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NclP09405 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
NclP09405 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
NclP09405 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NclP09405 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
NclP09405 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
NclP09405 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
NclP09405 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
NclP09405 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC32.59■■■□□ 2.81
NclP09405 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NclP09405 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NclP09405 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC32.57■■■□□ 2.8
NclP09405 AC093043.1-201ENSMUST00000226700 898 ntBASIC32.57■■■□□ 2.8
NclP09405 AC153524.1-201ENSMUST00000220436 1935 ntBASIC32.57■■■□□ 2.8
NclP09405 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NclP09405 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
NclP09405 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NclP09405 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NclP09405 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NclP09405 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
NclP09405 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NclP09405 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
NclP09405 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NclP09405 Gm22567-201ENSMUST00000175542 342 ntBASIC32.53■■■□□ 2.8
NclP09405 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
NclP09405 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NclP09405 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NclP09405 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NclP09405 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
NclP09405 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
NclP09405 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
NclP09405 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC32.52■■■□□ 2.8
NclP09405 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
NclP09405 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
NclP09405 Gm42501-201ENSMUST00000200220 1026 ntBASIC32.5■■■□□ 2.79
NclP09405 Gm18755-201ENSMUST00000218030 1099 ntBASIC32.5■■■□□ 2.79
NclP09405 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
NclP09405 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NclP09405 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC32.49■■■□□ 2.79
NclP09405 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NclP09405 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
NclP09405 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC32.48■■■□□ 2.79
NclP09405 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NclP09405 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC32.47■■■□□ 2.79
NclP09405 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
NclP09405 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
NclP09405 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
NclP09405 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NclP09405 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
NclP09405 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
NclP09405 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC32.46■■■□□ 2.79
NclP09405 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
NclP09405 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
NclP09405 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
NclP09405 Rps24-207ENSMUST00000224568 714 ntBASIC32.45■■■□□ 2.79
NclP09405 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
NclP09405 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
NclP09405 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
NclP09405 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
NclP09405 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NclP09405 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NclP09405 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NclP09405 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
NclP09405 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NclP09405 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
NclP09405 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
NclP09405 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NclP09405 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NclP09405 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC32.43■■■□□ 2.78
NclP09405 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
NclP09405 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC32.42■■■□□ 2.78
NclP09405 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
NclP09405 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
NclP09405 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
NclP09405 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
NclP09405 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NclP09405 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NclP09405 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NclP09405 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms