Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LtaP09225 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LtaP09225 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LtaP09225 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LtaP09225 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LtaP09225 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LtaP09225 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LtaP09225 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.84■□□□□ 0.45
LtaP09225 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LtaP09225 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LtaP09225 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.83■□□□□ 0.44
LtaP09225 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LtaP09225 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LtaP09225 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LtaP09225 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LtaP09225 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LtaP09225 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LtaP09225 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LtaP09225 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LtaP09225 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LtaP09225 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LtaP09225 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LtaP09225 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtaP09225 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LtaP09225 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.8■□□□□ 0.44
LtaP09225 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtaP09225 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LtaP09225 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtaP09225 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtaP09225 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.8■□□□□ 0.44
LtaP09225 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.79■□□□□ 0.44
LtaP09225 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.79■□□□□ 0.44
LtaP09225 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtaP09225 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtaP09225 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtaP09225 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.78■□□□□ 0.44
LtaP09225 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtaP09225 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtaP09225 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtaP09225 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.77■□□□□ 0.44
LtaP09225 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtaP09225 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LtaP09225 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtaP09225 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtaP09225 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
LtaP09225 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LtaP09225 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LtaP09225 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LtaP09225 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtaP09225 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LtaP09225 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LtaP09225 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LtaP09225 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.75■□□□□ 0.43
LtaP09225 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LtaP09225 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.75■□□□□ 0.43
LtaP09225 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LtaP09225 Gm5921-201ENSMUST00000075898 882 ntBASIC17.75■□□□□ 0.43
LtaP09225 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.75■□□□□ 0.43
LtaP09225 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LtaP09225 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LtaP09225 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LtaP09225 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LtaP09225 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LtaP09225 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LtaP09225 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LtaP09225 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LtaP09225 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LtaP09225 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LtaP09225 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.72■□□□□ 0.43
LtaP09225 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LtaP09225 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LtaP09225 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 699.3 ms