Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a2P08122 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a2P08122 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a2P08122 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a2P08122 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a2P08122 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.95■□□□□ 0.94
Col4a2P08122 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a2P08122 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Col4a2P08122 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a2P08122 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a2P08122 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col4a2P08122 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.93■□□□□ 0.94
Col4a2P08122 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a2P08122 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Col4a2P08122 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a2P08122 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col4a2P08122 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Col4a2P08122 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.91■□□□□ 0.94
Col4a2P08122 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a2P08122 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a2P08122 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.91■□□□□ 0.94
Col4a2P08122 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a2P08122 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Col4a2P08122 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Col4a2P08122 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Col4a2P08122 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a2P08122 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.9■□□□□ 0.94
Col4a2P08122 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a2P08122 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a2P08122 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a2P08122 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a2P08122 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Col4a2P08122 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a2P08122 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.9■□□□□ 0.94
Col4a2P08122 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a2P08122 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a2P08122 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Col4a2P08122 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.89■□□□□ 0.93
Col4a2P08122 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.89■□□□□ 0.93
Col4a2P08122 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a2P08122 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a2P08122 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a2P08122 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.88■□□□□ 0.93
Col4a2P08122 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a2P08122 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.87■□□□□ 0.93
Col4a2P08122 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a2P08122 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a2P08122 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.86■□□□□ 0.93
Col4a2P08122 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.86■□□□□ 0.93
Col4a2P08122 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a2P08122 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.85■□□□□ 0.93
Col4a2P08122 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a2P08122 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a2P08122 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.85■□□□□ 0.93
Col4a2P08122 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.85■□□□□ 0.93
Col4a2P08122 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a2P08122 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a2P08122 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a2P08122 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a2P08122 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a2P08122 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a2P08122 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a2P08122 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a2P08122 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.82■□□□□ 0.92
Col4a2P08122 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.82■□□□□ 0.92
Col4a2P08122 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a2P08122 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Col4a2P08122 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a2P08122 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a2P08122 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
Col4a2P08122 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a2P08122 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a2P08122 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.81■□□□□ 0.92
Col4a2P08122 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a2P08122 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Col4a2P08122 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a2P08122 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a2P08122 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.8■□□□□ 0.92
Col4a2P08122 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a2P08122 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Col4a2P08122 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a2P08122 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a2P08122 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a2P08122 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a2P08122 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col4a2P08122 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a2P08122 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a2P08122 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms