Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcnkO88874 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcnkO88874 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CcnkO88874 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CcnkO88874 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.3■□□□□ 0.68
CcnkO88874 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CcnkO88874 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CcnkO88874 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CcnkO88874 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CcnkO88874 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CcnkO88874 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CcnkO88874 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.29■□□□□ 0.68
CcnkO88874 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CcnkO88874 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CcnkO88874 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CcnkO88874 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CcnkO88874 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CcnkO88874 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CcnkO88874 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CcnkO88874 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CcnkO88874 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.27■□□□□ 0.68
CcnkO88874 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CcnkO88874 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CcnkO88874 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.27■□□□□ 0.68
CcnkO88874 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CcnkO88874 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CcnkO88874 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CcnkO88874 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CcnkO88874 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CcnkO88874 Gm11599-201ENSMUST00000118720 878 ntBASIC19.26■□□□□ 0.67
CcnkO88874 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CcnkO88874 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CcnkO88874 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CcnkO88874 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.25■□□□□ 0.67
CcnkO88874 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CcnkO88874 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.25■□□□□ 0.67
CcnkO88874 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CcnkO88874 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CcnkO88874 Gm4799-201ENSMUST00000095396 657 ntBASIC19.24■□□□□ 0.67
CcnkO88874 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CcnkO88874 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcnkO88874 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.23■□□□□ 0.67
CcnkO88874 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcnkO88874 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcnkO88874 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcnkO88874 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcnkO88874 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CcnkO88874 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CcnkO88874 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.22■□□□□ 0.67
CcnkO88874 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CcnkO88874 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CcnkO88874 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CcnkO88874 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.21■□□□□ 0.67
CcnkO88874 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CcnkO88874 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CcnkO88874 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.21■□□□□ 0.67
CcnkO88874 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CcnkO88874 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CcnkO88874 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CcnkO88874 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.2■□□□□ 0.66
CcnkO88874 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CcnkO88874 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.2■□□□□ 0.66
CcnkO88874 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CcnkO88874 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.2■□□□□ 0.66
CcnkO88874 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CcnkO88874 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CcnkO88874 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CcnkO88874 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CcnkO88874 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.19■□□□□ 0.66
CcnkO88874 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CcnkO88874 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CcnkO88874 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CcnkO88874 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
CcnkO88874 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CcnkO88874 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.18■□□□□ 0.66
CcnkO88874 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CcnkO88874 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CcnkO88874 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CcnkO88874 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CcnkO88874 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CcnkO88874 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CcnkO88874 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms