Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Best1O88870 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Best1O88870 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Best1O88870 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Best1O88870 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Best1O88870 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Best1O88870 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.32■■□□□ 1
Best1O88870 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
Best1O88870 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.32■■□□□ 1
Best1O88870 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.32■■□□□ 1
Best1O88870 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Best1O88870 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Best1O88870 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Best1O88870 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Best1O88870 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.31■■□□□ 1
Best1O88870 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.3■■□□□ 1
Best1O88870 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Best1O88870 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Best1O88870 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.3■■□□□ 1
Best1O88870 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Best1O88870 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.29■■□□□ 1
Best1O88870 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
Best1O88870 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Best1O88870 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.29■■□□□ 1
Best1O88870 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
Best1O88870 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Best1O88870 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.28■■□□□ 1
Best1O88870 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
Best1O88870 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Best1O88870 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Best1O88870 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Best1O88870 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Best1O88870 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Best1O88870 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Best1O88870 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Best1O88870 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Best1O88870 Gm15546-201ENSMUST00000122095 826 ntBASIC21.26■□□□□ 0.99
Best1O88870 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Best1O88870 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.26■□□□□ 0.99
Best1O88870 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best1O88870 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best1O88870 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Best1O88870 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Best1O88870 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Best1O88870 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Best1O88870 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Best1O88870 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.25■□□□□ 0.99
Best1O88870 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.25■□□□□ 0.99
Best1O88870 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.24■□□□□ 0.99
Best1O88870 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.24■□□□□ 0.99
Best1O88870 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.24■□□□□ 0.99
Best1O88870 Gm22567-201ENSMUST00000175542 342 ntBASIC21.24■□□□□ 0.99
Best1O88870 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.24■□□□□ 0.99
Best1O88870 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Best1O88870 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best1O88870 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Best1O88870 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best1O88870 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Best1O88870 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Best1O88870 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Best1O88870 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Best1O88870 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.22■□□□□ 0.99
Best1O88870 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Best1O88870 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best1O88870 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Best1O88870 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best1O88870 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.21■□□□□ 0.99
Best1O88870 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Best1O88870 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Best1O88870 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Best1O88870 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best1O88870 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best1O88870 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best1O88870 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Best1O88870 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best1O88870 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Best1O88870 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Best1O88870 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.18■□□□□ 0.98
Best1O88870 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Best1O88870 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.18■□□□□ 0.98
Best1O88870 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Best1O88870 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Best1O88870 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.17■□□□□ 0.98
Best1O88870 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Best1O88870 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best1O88870 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Best1O88870 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Best1O88870 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Best1O88870 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best1O88870 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Best1O88870 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Best1O88870 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Best1O88870 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best1O88870 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms