Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shoc2O88520 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Shoc2O88520 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.65■■□□□ 1.22
Shoc2O88520 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shoc2O88520 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shoc2O88520 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Shoc2O88520 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Shoc2O88520 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shoc2O88520 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.64■■□□□ 1.21
Shoc2O88520 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shoc2O88520 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shoc2O88520 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shoc2O88520 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shoc2O88520 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shoc2O88520 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.63■■□□□ 1.21
Shoc2O88520 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.63■■□□□ 1.21
Shoc2O88520 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.63■■□□□ 1.21
Shoc2O88520 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shoc2O88520 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shoc2O88520 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.62■■□□□ 1.21
Shoc2O88520 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Shoc2O88520 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Shoc2O88520 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.62■■□□□ 1.21
Shoc2O88520 Gm27502-201ENSMUST00000183495 199 ntBASIC22.62■■□□□ 1.21
Shoc2O88520 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shoc2O88520 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shoc2O88520 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shoc2O88520 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shoc2O88520 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shoc2O88520 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shoc2O88520 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.61■■□□□ 1.21
Shoc2O88520 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Shoc2O88520 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Shoc2O88520 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shoc2O88520 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.61■■□□□ 1.21
Shoc2O88520 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shoc2O88520 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.6■■□□□ 1.21
Shoc2O88520 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.6■■□□□ 1.21
Shoc2O88520 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.6■■□□□ 1.21
Shoc2O88520 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shoc2O88520 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Shoc2O88520 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shoc2O88520 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shoc2O88520 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.58■■□□□ 1.21
Shoc2O88520 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shoc2O88520 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.58■■□□□ 1.21
Shoc2O88520 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Shoc2O88520 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Shoc2O88520 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Shoc2O88520 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shoc2O88520 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Shoc2O88520 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shoc2O88520 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shoc2O88520 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shoc2O88520 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shoc2O88520 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Shoc2O88520 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
Shoc2O88520 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.54■■□□□ 1.2
Shoc2O88520 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shoc2O88520 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
Shoc2O88520 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shoc2O88520 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Shoc2O88520 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shoc2O88520 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Shoc2O88520 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Shoc2O88520 Gm44428-201ENSMUST00000204474 874 ntBASIC22.53■■□□□ 1.2
Shoc2O88520 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shoc2O88520 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Shoc2O88520 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Shoc2O88520 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shoc2O88520 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.52■■□□□ 1.2
Shoc2O88520 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shoc2O88520 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.52■■□□□ 1.2
Shoc2O88520 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shoc2O88520 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.52■■□□□ 1.2
Shoc2O88520 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shoc2O88520 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shoc2O88520 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shoc2O88520 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Shoc2O88520 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Shoc2O88520 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shoc2O88520 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Shoc2O88520 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shoc2O88520 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.51■■□□□ 1.19
Shoc2O88520 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shoc2O88520 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Shoc2O88520 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shoc2O88520 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.5■■□□□ 1.19
Shoc2O88520 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shoc2O88520 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shoc2O88520 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shoc2O88520 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Shoc2O88520 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.49■■□□□ 1.19
Shoc2O88520 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms