Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Atf6bO35451 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6bO35451 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6bO35451 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6bO35451 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6bO35451 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6bO35451 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.87■□□□□ 0.61
Atf6bO35451 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6bO35451 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6bO35451 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6bO35451 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.86■□□□□ 0.61
Atf6bO35451 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Atf6bO35451 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6bO35451 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Atf6bO35451 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6bO35451 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6bO35451 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.86■□□□□ 0.61
Atf6bO35451 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.86■□□□□ 0.61
Atf6bO35451 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6bO35451 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Atf6bO35451 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.85■□□□□ 0.61
Atf6bO35451 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Atf6bO35451 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Atf6bO35451 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6bO35451 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6bO35451 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6bO35451 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6bO35451 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6bO35451 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6bO35451 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Atf6bO35451 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.83■□□□□ 0.61
Atf6bO35451 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf6bO35451 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf6bO35451 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf6bO35451 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.83■□□□□ 0.6
Atf6bO35451 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6bO35451 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atf6bO35451 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atf6bO35451 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6bO35451 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6bO35451 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Atf6bO35451 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6bO35451 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6bO35451 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Atf6bO35451 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Atf6bO35451 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6bO35451 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.81■□□□□ 0.6
Atf6bO35451 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6bO35451 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6bO35451 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.81■□□□□ 0.6
Atf6bO35451 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Atf6bO35451 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Atf6bO35451 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6bO35451 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.8■□□□□ 0.6
Atf6bO35451 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6bO35451 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6bO35451 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6bO35451 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Atf6bO35451 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atf6bO35451 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6bO35451 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6bO35451 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6bO35451 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6bO35451 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6bO35451 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6bO35451 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6bO35451 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.77■□□□□ 0.6
Atf6bO35451 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6bO35451 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6bO35451 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6bO35451 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6bO35451 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Atf6bO35451 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6bO35451 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6bO35451 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.76■□□□□ 0.59
Atf6bO35451 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.76■□□□□ 0.59
Atf6bO35451 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Atf6bO35451 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6bO35451 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6bO35451 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6bO35451 Gm10420-201ENSMUST00000121713 882 ntBASIC18.75■□□□□ 0.59
Atf6bO35451 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6bO35451 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6bO35451 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6bO35451 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6bO35451 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6bO35451 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atf6bO35451 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.73■□□□□ 0.59
Atf6bO35451 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms