Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn1O35350 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn1O35350 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Capn1O35350 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.12■□□□□ 0.81
Capn1O35350 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn1O35350 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn1O35350 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn1O35350 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn1O35350 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn1O35350 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Capn1O35350 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Capn1O35350 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Capn1O35350 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn1O35350 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Capn1O35350 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Capn1O35350 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Capn1O35350 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn1O35350 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Capn1O35350 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Capn1O35350 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Capn1O35350 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Capn1O35350 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Capn1O35350 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Capn1O35350 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Capn1O35350 Gm13238-201ENSMUST00000117655 780 ntBASIC20.08■□□□□ 0.81
Capn1O35350 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Capn1O35350 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Capn1O35350 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Capn1O35350 Gm15546-201ENSMUST00000122095 826 ntBASIC20.07■□□□□ 0.8
Capn1O35350 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn1O35350 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.06■□□□□ 0.8
Capn1O35350 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.06■□□□□ 0.8
Capn1O35350 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn1O35350 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Capn1O35350 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Capn1O35350 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn1O35350 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Capn1O35350 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Capn1O35350 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn1O35350 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Capn1O35350 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn1O35350 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn1O35350 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn1O35350 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn1O35350 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn1O35350 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.04■□□□□ 0.8
Capn1O35350 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.04■□□□□ 0.8
Capn1O35350 Gm43566-201ENSMUST00000196851 808 ntBASIC20.04■□□□□ 0.8
Capn1O35350 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Capn1O35350 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.04■□□□□ 0.8
Capn1O35350 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Capn1O35350 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Capn1O35350 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Capn1O35350 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn1O35350 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Capn1O35350 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Capn1O35350 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.03■□□□□ 0.8
Capn1O35350 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn1O35350 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.02■□□□□ 0.8
Capn1O35350 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Capn1O35350 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.02■□□□□ 0.8
Capn1O35350 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Capn1O35350 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.02■□□□□ 0.8
Capn1O35350 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Capn1O35350 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.02■□□□□ 0.79
Capn1O35350 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Capn1O35350 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Capn1O35350 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.01■□□□□ 0.79
Capn1O35350 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Capn1O35350 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20■□□□□ 0.79
Capn1O35350 Gm45444-201ENSMUST00000211394 898 ntBASIC20■□□□□ 0.79
Capn1O35350 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20■□□□□ 0.79
Capn1O35350 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20■□□□□ 0.79
Capn1O35350 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Capn1O35350 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Capn1O35350 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Capn1O35350 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Capn1O35350 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Capn1O35350 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Capn1O35350 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Capn1O35350 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Capn1O35350 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Capn1O35350 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.99■□□□□ 0.79
Capn1O35350 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Capn1O35350 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Capn1O35350 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Capn1O35350 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Capn1O35350 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Capn1O35350 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Capn1O35350 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Capn1O35350 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Capn1O35350 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Capn1O35350 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms