Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps1O08983 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps1O08983 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps1O08983 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hps1O08983 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hps1O08983 Scarna2-201ENSMUST00000157560 414 ntBASIC20.05■□□□□ 0.8
Hps1O08983 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hps1O08983 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps1O08983 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps1O08983 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps1O08983 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hps1O08983 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps1O08983 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps1O08983 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps1O08983 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hps1O08983 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
Hps1O08983 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps1O08983 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hps1O08983 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hps1O08983 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Hps1O08983 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps1O08983 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps1O08983 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Hps1O08983 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.03■□□□□ 0.8
Hps1O08983 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps1O08983 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps1O08983 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hps1O08983 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hps1O08983 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hps1O08983 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hps1O08983 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Hps1O08983 Gm9806-201ENSMUST00000051080 552 ntBASIC20.02■□□□□ 0.8
Hps1O08983 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hps1O08983 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hps1O08983 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hps1O08983 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.02■□□□□ 0.79
Hps1O08983 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Hps1O08983 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.01■□□□□ 0.79
Hps1O08983 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hps1O08983 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hps1O08983 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hps1O08983 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hps1O08983 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hps1O08983 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hps1O08983 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hps1O08983 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hps1O08983 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hps1O08983 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hps1O08983 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hps1O08983 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hps1O08983 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hps1O08983 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hps1O08983 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hps1O08983 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hps1O08983 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hps1O08983 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.98■□□□□ 0.79
Hps1O08983 Gm12366-201ENSMUST00000121722 873 ntBASIC19.98■□□□□ 0.79
Hps1O08983 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.98■□□□□ 0.79
Hps1O08983 Gm37136-201ENSMUST00000194368 194 ntBASIC19.98■□□□□ 0.79
Hps1O08983 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hps1O08983 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.98■□□□□ 0.79
Hps1O08983 Gm5786-201ENSMUST00000085368 882 ntBASIC19.98■□□□□ 0.79
Hps1O08983 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hps1O08983 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hps1O08983 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hps1O08983 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hps1O08983 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hps1O08983 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.97■□□□□ 0.79
Hps1O08983 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Hps1O08983 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hps1O08983 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Hps1O08983 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hps1O08983 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hps1O08983 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hps1O08983 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hps1O08983 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hps1O08983 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hps1O08983 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hps1O08983 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hps1O08983 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.95■□□□□ 0.78
Hps1O08983 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hps1O08983 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hps1O08983 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hps1O08983 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.94■□□□□ 0.78
Hps1O08983 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Hps1O08983 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hps1O08983 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hps1O08983 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hps1O08983 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms