Protein–RNA interactions for Protein: L7N2C0

Gm6401, Predicted gene 6401 (Fragment), mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6401L7N2C0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm6401L7N2C0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm6401L7N2C0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6401L7N2C0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gm6401L7N2C0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6401L7N2C0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6401L7N2C0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6401L7N2C0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6401L7N2C0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm6401L7N2C0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.44■□□□□ 0.7
Gm6401L7N2C0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6401L7N2C0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6401L7N2C0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6401L7N2C0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6401L7N2C0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6401L7N2C0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Gm6401L7N2C0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm6401L7N2C0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm6401L7N2C0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6401L7N2C0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm6401L7N2C0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6401L7N2C0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6401L7N2C0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm6401L7N2C0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6401L7N2C0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm6401L7N2C0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm6401L7N2C0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6401L7N2C0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.39■□□□□ 0.69
Gm6401L7N2C0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm6401L7N2C0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm6401L7N2C0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm6401L7N2C0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm6401L7N2C0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm6401L7N2C0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm6401L7N2C0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm6401L7N2C0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm6401L7N2C0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6401L7N2C0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6401L7N2C0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6401L7N2C0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Gm6401L7N2C0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm6401L7N2C0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm6401L7N2C0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm6401L7N2C0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm6401L7N2C0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gm6401L7N2C0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm6401L7N2C0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm6401L7N2C0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm6401L7N2C0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm6401L7N2C0 Gm30023-201ENSMUST00000197970 889 ntBASIC19.32■□□□□ 0.68
Gm6401L7N2C0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm6401L7N2C0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Gm6401L7N2C0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm6401L7N2C0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm6401L7N2C0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm6401L7N2C0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm6401L7N2C0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm6401L7N2C0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6401L7N2C0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm6401L7N2C0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6401L7N2C0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6401L7N2C0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm6401L7N2C0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm6401L7N2C0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6401L7N2C0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
Gm6401L7N2C0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.28■□□□□ 0.68
Gm6401L7N2C0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6401L7N2C0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms