Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.72■□□□□ 0.75
Gm3543D3Z235 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3543D3Z235 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3543D3Z235 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.72■□□□□ 0.75
Gm3543D3Z235 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.72■□□□□ 0.75
Gm3543D3Z235 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3543D3Z235 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3543D3Z235 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.72■□□□□ 0.75
Gm3543D3Z235 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3543D3Z235 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3543D3Z235 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3543D3Z235 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gm3543D3Z235 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3543D3Z235 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3543D3Z235 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3543D3Z235 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3543D3Z235 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3543D3Z235 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm3543D3Z235 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3543D3Z235 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3543D3Z235 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Gm3543D3Z235 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.69■□□□□ 0.74
Gm3543D3Z235 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3543D3Z235 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3543D3Z235 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.69■□□□□ 0.74
Gm3543D3Z235 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3543D3Z235 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3543D3Z235 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3543D3Z235 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3543D3Z235 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3543D3Z235 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3543D3Z235 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3543D3Z235 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.68■□□□□ 0.74
Gm3543D3Z235 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3543D3Z235 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3543D3Z235 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gm3543D3Z235 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Gm3543D3Z235 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Gm3543D3Z235 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3543D3Z235 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3543D3Z235 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3543D3Z235 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3543D3Z235 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3543D3Z235 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm3543D3Z235 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3543D3Z235 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3543D3Z235 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3543D3Z235 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3543D3Z235 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Gm3543D3Z235 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Gm3543D3Z235 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3543D3Z235 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gm3543D3Z235 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm3543D3Z235 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Gm3543D3Z235 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm3543D3Z235 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm3543D3Z235 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3543D3Z235 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm3543D3Z235 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm3543D3Z235 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm3543D3Z235 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.58■□□□□ 0.73
Gm3543D3Z235 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Gm3543D3Z235 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm3543D3Z235 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.58■□□□□ 0.72
Gm3543D3Z235 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3543D3Z235 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3543D3Z235 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm3543D3Z235 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Gm3543D3Z235 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3543D3Z235 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3543D3Z235 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms