Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
5830411N06RikB3F5L4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
5830411N06RikB3F5L4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
5830411N06RikB3F5L4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.73■■□□□ 1.23
5830411N06RikB3F5L4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.73■■□□□ 1.23
5830411N06RikB3F5L4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
5830411N06RikB3F5L4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
5830411N06RikB3F5L4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
5830411N06RikB3F5L4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
5830411N06RikB3F5L4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
5830411N06RikB3F5L4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
5830411N06RikB3F5L4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
5830411N06RikB3F5L4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
5830411N06RikB3F5L4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.71■■□□□ 1.23
5830411N06RikB3F5L4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
5830411N06RikB3F5L4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
5830411N06RikB3F5L4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.7■■□□□ 1.22
5830411N06RikB3F5L4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.7■■□□□ 1.22
5830411N06RikB3F5L4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.7■■□□□ 1.22
5830411N06RikB3F5L4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
5830411N06RikB3F5L4 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.69■■□□□ 1.22
5830411N06RikB3F5L4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
5830411N06RikB3F5L4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
5830411N06RikB3F5L4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Gm22567-201ENSMUST00000175542 342 ntBASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
5830411N06RikB3F5L4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Gm45444-201ENSMUST00000211394 898 ntBASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
5830411N06RikB3F5L4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
5830411N06RikB3F5L4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
5830411N06RikB3F5L4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
5830411N06RikB3F5L4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
5830411N06RikB3F5L4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
5830411N06RikB3F5L4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
5830411N06RikB3F5L4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
5830411N06RikB3F5L4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.65■■□□□ 1.22
5830411N06RikB3F5L4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
5830411N06RikB3F5L4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
5830411N06RikB3F5L4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
5830411N06RikB3F5L4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.65■■□□□ 1.22
5830411N06RikB3F5L4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
5830411N06RikB3F5L4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
5830411N06RikB3F5L4 Gm43566-201ENSMUST00000196851 808 ntBASIC22.64■■□□□ 1.21
5830411N06RikB3F5L4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
5830411N06RikB3F5L4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
5830411N06RikB3F5L4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
5830411N06RikB3F5L4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
5830411N06RikB3F5L4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
5830411N06RikB3F5L4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.63■■□□□ 1.21
5830411N06RikB3F5L4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
5830411N06RikB3F5L4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
5830411N06RikB3F5L4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.62■■□□□ 1.21
5830411N06RikB3F5L4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
5830411N06RikB3F5L4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
5830411N06RikB3F5L4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
5830411N06RikB3F5L4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
5830411N06RikB3F5L4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
5830411N06RikB3F5L4 Gm13238-201ENSMUST00000117655 780 ntBASIC22.61■■□□□ 1.21
5830411N06RikB3F5L4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
5830411N06RikB3F5L4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
5830411N06RikB3F5L4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
5830411N06RikB3F5L4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
5830411N06RikB3F5L4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
5830411N06RikB3F5L4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
5830411N06RikB3F5L4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
5830411N06RikB3F5L4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
5830411N06RikB3F5L4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
5830411N06RikB3F5L4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.58■■□□□ 1.21
5830411N06RikB3F5L4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
5830411N06RikB3F5L4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.58■■□□□ 1.21
5830411N06RikB3F5L4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms