Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv29A0A0G2LB96 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Gm22567-201ENSMUST00000175542 342 ntBASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv29A0A0G2LB96 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv29A0A0G2LB96 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv29A0A0G2LB96 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv29A0A0G2LB96 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv29A0A0G2LB96 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv29A0A0G2LB96 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv29A0A0G2LB96 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Mir3960-201ENSMUST00000198213 73 ntBASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv29A0A0G2LB96 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv29A0A0G2LB96 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Trbv29A0A0G2LB96 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trbv29A0A0G2LB96 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 Terc-201ENSMUST00000082862 423 ntBASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv29A0A0G2LB96 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv29A0A0G2LB96 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv29A0A0G2LB96 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv29A0A0G2LB96 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv29A0A0G2LB96 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbv29A0A0G2LB96 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv29A0A0G2LB96 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv29A0A0G2LB96 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.1■□□□□ 0.49
Trbv29A0A0G2LB96 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv29A0A0G2LB96 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.09■□□□□ 0.49
Trbv29A0A0G2LB96 Gm45364-201ENSMUST00000210883 159 ntBASIC18.09■□□□□ 0.49
Trbv29A0A0G2LB96 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv29A0A0G2LB96 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv29A0A0G2LB96 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv29A0A0G2LB96 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv29A0A0G2LB96 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trbv29A0A0G2LB96 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv29A0A0G2LB96 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.08■□□□□ 0.49
Trbv29A0A0G2LB96 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trbv29A0A0G2LB96 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms