Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tcrg-V3A0A0G2JEW2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcrg-V3A0A0G2JEW2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tcrg-V3A0A0G2JEW2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tcrg-V3A0A0G2JEW2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tcrg-V3A0A0G2JEW2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Tcrg-V3A0A0G2JEW2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcrg-V3A0A0G2JEW2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tcrg-V3A0A0G2JEW2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tcrg-V3A0A0G2JEW2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Tcrg-V3A0A0G2JEW2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Tcrg-V3A0A0G2JEW2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tcrg-V3A0A0G2JEW2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tcrg-V3A0A0G2JEW2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.28■■□□□ 1
Tcrg-V3A0A0G2JEW2 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.28■■□□□ 1
Tcrg-V3A0A0G2JEW2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcrg-V3A0A0G2JEW2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Tcrg-V3A0A0G2JEW2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.27■■□□□ 1
Tcrg-V3A0A0G2JEW2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tcrg-V3A0A0G2JEW2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Tcrg-V3A0A0G2JEW2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Tcrg-V3A0A0G2JEW2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.25■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.25■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.25■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Gm45444-201ENSMUST00000211394 898 ntBASIC21.23■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.22■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Gm13238-201ENSMUST00000117655 780 ntBASIC21.22■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.21■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tcrg-V3A0A0G2JEW2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Gm43566-201ENSMUST00000196851 808 ntBASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms