Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.44■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Gm25262-201ENSMUST00000174934 133 ntBASIC16.44■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.43■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Gm27322-201ENSMUST00000184007 104 ntBASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.39■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.37■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Peli2-204ENSMUST00000226513 1320 ntBASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Tcrg-V4A0A0B4J1J8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.33■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcrg-V4A0A0B4J1J8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms