Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv2A0A0B4J1G8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv2A0A0B4J1G8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv2A0A0B4J1G8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv2A0A0B4J1G8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv2A0A0B4J1G8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv2A0A0B4J1G8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.46■□□□□ 0.71
Trbv2A0A0B4J1G8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.45■□□□□ 0.7
Trbv2A0A0B4J1G8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trbv2A0A0B4J1G8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.45■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.45■□□□□ 0.7
Trbv2A0A0B4J1G8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv2A0A0B4J1G8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm9812-201ENSMUST00000061934 968 ntBASIC19.44■□□□□ 0.7
Trbv2A0A0B4J1G8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv2A0A0B4J1G8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv2A0A0B4J1G8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv2A0A0B4J1G8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv2A0A0B4J1G8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.43■□□□□ 0.7
Trbv2A0A0B4J1G8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.42■□□□□ 0.7
Trbv2A0A0B4J1G8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv2A0A0B4J1G8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm4799-201ENSMUST00000095396 657 ntBASIC19.41■□□□□ 0.7
Trbv2A0A0B4J1G8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv2A0A0B4J1G8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.41■□□□□ 0.7
Trbv2A0A0B4J1G8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv2A0A0B4J1G8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbv2A0A0B4J1G8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbv2A0A0B4J1G8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbv2A0A0B4J1G8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.39■□□□□ 0.69
Trbv2A0A0B4J1G8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.39■□□□□ 0.69
Trbv2A0A0B4J1G8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.39■□□□□ 0.69
Trbv2A0A0B4J1G8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv2A0A0B4J1G8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv2A0A0B4J1G8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv2A0A0B4J1G8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.38■□□□□ 0.69
Trbv2A0A0B4J1G8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trbv2A0A0B4J1G8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
Trbv2A0A0B4J1G8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.37■□□□□ 0.69
Trbv2A0A0B4J1G8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv2A0A0B4J1G8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trbv2A0A0B4J1G8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv2A0A0B4J1G8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms