Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-43A0A0A6YXN5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.39■□□□□ 0.85
Ighv1-43A0A0A6YXN5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.39■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-43A0A0A6YXN5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ighv1-43A0A0A6YXN5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.33■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ighv1-43A0A0A6YXN5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.33■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.33■□□□□ 0.85
Ighv1-43A0A0A6YXN5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.33■□□□□ 0.85
Ighv1-43A0A0A6YXN5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gm15820-201ENSMUST00000201566 728 ntBASIC20.32■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ighv1-43A0A0A6YXN5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ighv1-43A0A0A6YXN5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.28■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.28■□□□□ 0.84
Ighv1-43A0A0A6YXN5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.28■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv1-43A0A0A6YXN5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.26■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.26■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.26■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.25■□□□□ 0.83
Ighv1-43A0A0A6YXN5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms