Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-6A0A075B640 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-6A0A075B640 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav7-6A0A075B640 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-6A0A075B640 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-6A0A075B640 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav7-6A0A075B640 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-6A0A075B640 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-6A0A075B640 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Trav7-6A0A075B640 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-6A0A075B640 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav7-6A0A075B640 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-6A0A075B640 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-6A0A075B640 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav7-6A0A075B640 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-6A0A075B640 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav7-6A0A075B640 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-6A0A075B640 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav7-6A0A075B640 Gm4799-201ENSMUST00000095396 657 ntBASIC15.22■□□□□ 0.03
Trav7-6A0A075B640 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav7-6A0A075B640 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav7-6A0A075B640 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-6A0A075B640 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav7-6A0A075B640 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav7-6A0A075B640 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-6A0A075B640 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-6A0A075B640 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-6A0A075B640 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav7-6A0A075B640 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav7-6A0A075B640 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7-6A0A075B640 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7-6A0A075B640 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-6A0A075B640 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-6A0A075B640 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-6A0A075B640 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms