Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4d-3A0A075B625 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav4d-3A0A075B625 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav4d-3A0A075B625 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4d-3A0A075B625 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4d-3A0A075B625 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav4d-3A0A075B625 Gm30023-201ENSMUST00000197970 889 ntBASIC14.89□□□□□ -0.03
Trav4d-3A0A075B625 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4d-3A0A075B625 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4d-3A0A075B625 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4d-3A0A075B625 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav4d-3A0A075B625 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.89□□□□□ -0.03
Trav4d-3A0A075B625 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav4d-3A0A075B625 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav4d-3A0A075B625 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav4d-3A0A075B625 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4d-3A0A075B625 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4d-3A0A075B625 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4d-3A0A075B625 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4d-3A0A075B625 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4d-3A0A075B625 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4d-3A0A075B625 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms