Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav7n-4A0A075B620 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7n-4A0A075B620 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav7n-4A0A075B620 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
Trav7n-4A0A075B620 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav7n-4A0A075B620 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.63■□□□□ 0.25
Trav7n-4A0A075B620 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Trav7n-4A0A075B620 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7n-4A0A075B620 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav7n-4A0A075B620 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav7n-4A0A075B620 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav7n-4A0A075B620 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7n-4A0A075B620 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav7n-4A0A075B620 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.61■□□□□ 0.25
Trav7n-4A0A075B620 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav7n-4A0A075B620 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav7n-4A0A075B620 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-4A0A075B620 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav7n-4A0A075B620 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-4A0A075B620 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-4A0A075B620 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-4A0A075B620 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7n-4A0A075B620 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7n-4A0A075B620 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.58■□□□□ 0.25
Trav7n-4A0A075B620 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7n-4A0A075B620 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.58■□□□□ 0.25
Trav7n-4A0A075B620 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-4A0A075B620 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7n-4A0A075B620 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav7n-4A0A075B620 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7n-4A0A075B620 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-4A0A075B620 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav7n-4A0A075B620 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7n-4A0A075B620 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Trav7n-4A0A075B620 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-4A0A075B620 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7n-4A0A075B620 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-4A0A075B620 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav7n-4A0A075B620 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-4A0A075B620 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7n-4A0A075B620 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7n-4A0A075B620 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7n-4A0A075B620 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav7n-4A0A075B620 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7n-4A0A075B620 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-4A0A075B620 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trav7n-4A0A075B620 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-4A0A075B620 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7n-4A0A075B620 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-4A0A075B620 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-4A0A075B620 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-4A0A075B620 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7n-4A0A075B620 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7n-4A0A075B620 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7n-4A0A075B620 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-4A0A075B620 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-4A0A075B620 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-4A0A075B620 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms