Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RpgrQ9R0X5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RpgrQ9R0X5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RpgrQ9R0X5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RpgrQ9R0X5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RpgrQ9R0X5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RpgrQ9R0X5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RpgrQ9R0X5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RpgrQ9R0X5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RpgrQ9R0X5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RpgrQ9R0X5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RpgrQ9R0X5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RpgrQ9R0X5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RpgrQ9R0X5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RpgrQ9R0X5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RpgrQ9R0X5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RpgrQ9R0X5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RpgrQ9R0X5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RpgrQ9R0X5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RpgrQ9R0X5 Terc-201ENSMUST00000082862 423 ntBASIC22.13■■□□□ 1.13
RpgrQ9R0X5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RpgrQ9R0X5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RpgrQ9R0X5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RpgrQ9R0X5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RpgrQ9R0X5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RpgrQ9R0X5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RpgrQ9R0X5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RpgrQ9R0X5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RpgrQ9R0X5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
RpgrQ9R0X5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.1■■□□□ 1.13
RpgrQ9R0X5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Gm9806-201ENSMUST00000051080 552 ntBASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RpgrQ9R0X5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RpgrQ9R0X5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RpgrQ9R0X5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RpgrQ9R0X5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RpgrQ9R0X5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RpgrQ9R0X5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RpgrQ9R0X5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Gm11687-201ENSMUST00000118911 886 ntBASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
RpgrQ9R0X5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RpgrQ9R0X5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RpgrQ9R0X5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RpgrQ9R0X5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RpgrQ9R0X5 Scarna2-201ENSMUST00000157560 414 ntBASIC22.05■■□□□ 1.12
RpgrQ9R0X5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RpgrQ9R0X5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RpgrQ9R0X5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms