Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clcn2Q9R0A1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Clcn2Q9R0A1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Clcn2Q9R0A1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.52■■□□□ 1.2
Clcn2Q9R0A1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Clcn2Q9R0A1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Clcn2Q9R0A1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Clcn2Q9R0A1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clcn2Q9R0A1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clcn2Q9R0A1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clcn2Q9R0A1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Clcn2Q9R0A1 Gm9812-201ENSMUST00000061934 968 ntBASIC22.51■■□□□ 1.19
Clcn2Q9R0A1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Clcn2Q9R0A1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Clcn2Q9R0A1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Clcn2Q9R0A1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.48■■□□□ 1.19
Clcn2Q9R0A1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn2Q9R0A1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.47■■□□□ 1.19
Clcn2Q9R0A1 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.47■■□□□ 1.19
Clcn2Q9R0A1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn2Q9R0A1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.46■■□□□ 1.19
Clcn2Q9R0A1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn2Q9R0A1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Clcn2Q9R0A1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn2Q9R0A1 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.46■■□□□ 1.19
Clcn2Q9R0A1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn2Q9R0A1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.45■■□□□ 1.18
Clcn2Q9R0A1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn2Q9R0A1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn2Q9R0A1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn2Q9R0A1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn2Q9R0A1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.45■■□□□ 1.18
Clcn2Q9R0A1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn2Q9R0A1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Clcn2Q9R0A1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clcn2Q9R0A1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.43■■□□□ 1.18
Clcn2Q9R0A1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Clcn2Q9R0A1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.42■■□□□ 1.18
Clcn2Q9R0A1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn2Q9R0A1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn2Q9R0A1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn2Q9R0A1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn2Q9R0A1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn2Q9R0A1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn2Q9R0A1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Clcn2Q9R0A1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Clcn2Q9R0A1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Clcn2Q9R0A1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Clcn2Q9R0A1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Clcn2Q9R0A1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Clcn2Q9R0A1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Clcn2Q9R0A1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Clcn2Q9R0A1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Clcn2Q9R0A1 Scarna2-201ENSMUST00000157560 414 ntBASIC22.36■■□□□ 1.17
Clcn2Q9R0A1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.36■■□□□ 1.17
Clcn2Q9R0A1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms