Protein–RNA interactions for Protein: Q9D304

Rnf128, E3 ubiquitin-protein ligase RNF128, mousemouse

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf128Q9D304 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rnf128Q9D304 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf128Q9D304 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf128Q9D304 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf128Q9D304 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf128Q9D304 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf128Q9D304 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf128Q9D304 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rnf128Q9D304 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.14■□□□□ 0.81
Rnf128Q9D304 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf128Q9D304 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf128Q9D304 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Rnf128Q9D304 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnf128Q9D304 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf128Q9D304 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf128Q9D304 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf128Q9D304 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf128Q9D304 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf128Q9D304 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf128Q9D304 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf128Q9D304 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf128Q9D304 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf128Q9D304 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf128Q9D304 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf128Q9D304 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rnf128Q9D304 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf128Q9D304 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf128Q9D304 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf128Q9D304 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Rnf128Q9D304 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf128Q9D304 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.07■□□□□ 0.8
Rnf128Q9D304 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf128Q9D304 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf128Q9D304 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf128Q9D304 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.06■□□□□ 0.8
Rnf128Q9D304 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf128Q9D304 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf128Q9D304 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf128Q9D304 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf128Q9D304 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.05■□□□□ 0.8
Rnf128Q9D304 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf128Q9D304 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf128Q9D304 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf128Q9D304 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf128Q9D304 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf128Q9D304 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf128Q9D304 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf128Q9D304 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf128Q9D304 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf128Q9D304 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf128Q9D304 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf128Q9D304 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf128Q9D304 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rnf128Q9D304 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf128Q9D304 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf128Q9D304 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf128Q9D304 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf128Q9D304 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf128Q9D304 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.01■□□□□ 0.79
Rnf128Q9D304 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf128Q9D304 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf128Q9D304 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf128Q9D304 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf128Q9D304 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms