Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.4■■□□□ 1.18
Lsm7Q9CQQ8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Lsm7Q9CQQ8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lsm7Q9CQQ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Lsm7Q9CQQ8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Lsm7Q9CQQ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Lsm7Q9CQQ8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lsm7Q9CQQ8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lsm7Q9CQQ8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lsm7Q9CQQ8 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lsm7Q9CQQ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lsm7Q9CQQ8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lsm7Q9CQQ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Lsm7Q9CQQ8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Lsm7Q9CQQ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lsm7Q9CQQ8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lsm7Q9CQQ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lsm7Q9CQQ8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.34■■□□□ 1.17
Lsm7Q9CQQ8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lsm7Q9CQQ8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lsm7Q9CQQ8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lsm7Q9CQQ8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lsm7Q9CQQ8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.33■■□□□ 1.17
Lsm7Q9CQQ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.33■■□□□ 1.17
Lsm7Q9CQQ8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.33■■□□□ 1.17
Lsm7Q9CQQ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Lsm7Q9CQQ8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lsm7Q9CQQ8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lsm7Q9CQQ8 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.32■■□□□ 1.16
Lsm7Q9CQQ8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm7Q9CQQ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm7Q9CQQ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm7Q9CQQ8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm7Q9CQQ8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm7Q9CQQ8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm7Q9CQQ8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.31■■□□□ 1.16
Lsm7Q9CQQ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm7Q9CQQ8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm7Q9CQQ8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm7Q9CQQ8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Lsm7Q9CQQ8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm7Q9CQQ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm7Q9CQQ8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm7Q9CQQ8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.27■■□□□ 1.16
Lsm7Q9CQQ8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
Lsm7Q9CQQ8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.27■■□□□ 1.16
Lsm7Q9CQQ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Lsm7Q9CQQ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lsm7Q9CQQ8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lsm7Q9CQQ8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm7Q9CQQ8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.26■■□□□ 1.15
Lsm7Q9CQQ8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm7Q9CQQ8 Gm5812-201ENSMUST00000061073 957 ntBASIC22.26■■□□□ 1.15
Lsm7Q9CQQ8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm7Q9CQQ8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Gm45444-201ENSMUST00000211394 898 ntBASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Lsm7Q9CQQ8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm7Q9CQQ8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Lsm7Q9CQQ8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm7Q9CQQ8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm7Q9CQQ8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lsm7Q9CQQ8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.23■■□□□ 1.15
Lsm7Q9CQQ8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms