Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cotl1Q9CQI6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cotl1Q9CQI6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cotl1Q9CQI6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.11■□□□□ 0.33
Cotl1Q9CQI6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cotl1Q9CQI6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cotl1Q9CQI6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cotl1Q9CQI6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cotl1Q9CQI6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cotl1Q9CQI6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cotl1Q9CQI6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cotl1Q9CQI6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cotl1Q9CQI6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cotl1Q9CQI6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cotl1Q9CQI6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.08■□□□□ 0.33
Cotl1Q9CQI6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cotl1Q9CQI6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cotl1Q9CQI6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cotl1Q9CQI6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cotl1Q9CQI6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cotl1Q9CQI6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cotl1Q9CQI6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Gm30023-201ENSMUST00000197970 889 ntBASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.06■□□□□ 0.32
Cotl1Q9CQI6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cotl1Q9CQI6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cotl1Q9CQI6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.04■□□□□ 0.32
Cotl1Q9CQI6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cotl1Q9CQI6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cotl1Q9CQI6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cotl1Q9CQI6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cotl1Q9CQI6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cotl1Q9CQI6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cotl1Q9CQI6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Cotl1Q9CQI6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cotl1Q9CQI6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cotl1Q9CQI6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Cotl1Q9CQI6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cotl1Q9CQI6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cotl1Q9CQI6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cotl1Q9CQI6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17■□□□□ 0.31
Cotl1Q9CQI6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cotl1Q9CQI6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cotl1Q9CQI6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms