Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Trim33Q99PP7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim33Q99PP7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim33Q99PP7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim33Q99PP7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim33Q99PP7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.74■■□□□ 1.07
Trim33Q99PP7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim33Q99PP7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim33Q99PP7 Gm27502-201ENSMUST00000183495 199 ntBASIC21.73■■□□□ 1.07
Trim33Q99PP7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim33Q99PP7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.73■■□□□ 1.07
Trim33Q99PP7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.72■■□□□ 1.07
Trim33Q99PP7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim33Q99PP7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim33Q99PP7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim33Q99PP7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim33Q99PP7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim33Q99PP7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim33Q99PP7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim33Q99PP7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.71■■□□□ 1.07
Trim33Q99PP7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim33Q99PP7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trim33Q99PP7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.7■■□□□ 1.07
Trim33Q99PP7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim33Q99PP7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim33Q99PP7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim33Q99PP7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.7■■□□□ 1.06
Trim33Q99PP7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim33Q99PP7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim33Q99PP7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim33Q99PP7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim33Q99PP7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim33Q99PP7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Trim33Q99PP7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Trim33Q99PP7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim33Q99PP7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim33Q99PP7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim33Q99PP7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim33Q99PP7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim33Q99PP7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim33Q99PP7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim33Q99PP7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.66■■□□□ 1.06
Trim33Q99PP7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim33Q99PP7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim33Q99PP7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim33Q99PP7 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.65■■□□□ 1.06
Trim33Q99PP7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim33Q99PP7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim33Q99PP7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim33Q99PP7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.65■■□□□ 1.06
Trim33Q99PP7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim33Q99PP7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim33Q99PP7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim33Q99PP7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim33Q99PP7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim33Q99PP7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim33Q99PP7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim33Q99PP7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim33Q99PP7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim33Q99PP7 Gm14523-201ENSMUST00000117260 558 ntBASIC21.63■■□□□ 1.05
Trim33Q99PP7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.63■■□□□ 1.05
Trim33Q99PP7 Gm12366-201ENSMUST00000121722 873 ntBASIC21.63■■□□□ 1.05
Trim33Q99PP7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim33Q99PP7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.63■■□□□ 1.05
Trim33Q99PP7 Gm5786-201ENSMUST00000085368 882 ntBASIC21.63■■□□□ 1.05
Trim33Q99PP7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim33Q99PP7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trim33Q99PP7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim33Q99PP7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trim33Q99PP7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim33Q99PP7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim33Q99PP7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim33Q99PP7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim33Q99PP7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim33Q99PP7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim33Q99PP7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.6■■□□□ 1.05
Trim33Q99PP7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim33Q99PP7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Trim33Q99PP7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms