Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdh23Q99PF4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.28■■□□□ 1.32
Cdh23Q99PF4 Gm9847-201ENSMUST00000052528 599 ntBASIC23.28■■□□□ 1.32
Cdh23Q99PF4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdh23Q99PF4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh23Q99PF4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh23Q99PF4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh23Q99PF4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh23Q99PF4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh23Q99PF4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cdh23Q99PF4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Cdh23Q99PF4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cdh23Q99PF4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Cdh23Q99PF4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.25■■□□□ 1.31
Cdh23Q99PF4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh23Q99PF4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh23Q99PF4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh23Q99PF4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdh23Q99PF4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdh23Q99PF4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdh23Q99PF4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.22■■□□□ 1.31
Cdh23Q99PF4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdh23Q99PF4 Gm27454-201ENSMUST00000185090 204 ntBASIC23.22■■□□□ 1.31
Cdh23Q99PF4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdh23Q99PF4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cdh23Q99PF4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cdh23Q99PF4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cdh23Q99PF4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Cdh23Q99PF4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdh23Q99PF4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh23Q99PF4 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.2■■□□□ 1.3
Cdh23Q99PF4 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.2■■□□□ 1.3
Cdh23Q99PF4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh23Q99PF4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdh23Q99PF4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdh23Q99PF4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Cdh23Q99PF4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdh23Q99PF4 Gm12922-201ENSMUST00000120626 809 ntBASIC23.18■■□□□ 1.3
Cdh23Q99PF4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.18■■□□□ 1.3
Cdh23Q99PF4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Cdh23Q99PF4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Cdh23Q99PF4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdh23Q99PF4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdh23Q99PF4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cdh23Q99PF4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.17■■□□□ 1.3
Cdh23Q99PF4 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.17■■□□□ 1.3
Cdh23Q99PF4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh23Q99PF4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh23Q99PF4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh23Q99PF4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.16■■□□□ 1.3
Cdh23Q99PF4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.16■■□□□ 1.3
Cdh23Q99PF4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Cdh23Q99PF4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cdh23Q99PF4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Gm29257-201ENSMUST00000186115 639 ntBASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Gm7417-201ENSMUST00000192950 473 ntBASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Cdh23Q99PF4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdh23Q99PF4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdh23Q99PF4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.14■■□□□ 1.29
Cdh23Q99PF4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdh23Q99PF4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cdh23Q99PF4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdh23Q99PF4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdh23Q99PF4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cdh23Q99PF4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdh23Q99PF4 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.12■■□□□ 1.29
Cdh23Q99PF4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh23Q99PF4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh23Q99PF4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh23Q99PF4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdh23Q99PF4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cdh23Q99PF4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdh23Q99PF4 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.11■■□□□ 1.29
Cdh23Q99PF4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cdh23Q99PF4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Gm22238-201ENSMUST00000175222 88 ntBASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdh23Q99PF4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms