Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col20a1Q923P0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.42■■□□□ 1.82
Col20a1Q923P0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Col20a1Q923P0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Col20a1Q923P0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col20a1Q923P0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Col20a1Q923P0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col20a1Q923P0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Col20a1Q923P0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Col20a1Q923P0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.4■■□□□ 1.82
Col20a1Q923P0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col20a1Q923P0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col20a1Q923P0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col20a1Q923P0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Col20a1Q923P0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col20a1Q923P0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col20a1Q923P0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col20a1Q923P0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col20a1Q923P0 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.38■■□□□ 1.81
Col20a1Q923P0 Gm13238-201ENSMUST00000117655 780 ntBASIC26.38■■□□□ 1.81
Col20a1Q923P0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col20a1Q923P0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Col20a1Q923P0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col20a1Q923P0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col20a1Q923P0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.36■■□□□ 1.81
Col20a1Q923P0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col20a1Q923P0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col20a1Q923P0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.36■■□□□ 1.81
Col20a1Q923P0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col20a1Q923P0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.35■■□□□ 1.81
Col20a1Q923P0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.35■■□□□ 1.81
Col20a1Q923P0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.35■■□□□ 1.81
Col20a1Q923P0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col20a1Q923P0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Col20a1Q923P0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col20a1Q923P0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col20a1Q923P0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col20a1Q923P0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Col20a1Q923P0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col20a1Q923P0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Col20a1Q923P0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col20a1Q923P0 Gm15546-201ENSMUST00000122095 826 ntBASIC26.32■■□□□ 1.8
Col20a1Q923P0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col20a1Q923P0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Col20a1Q923P0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col20a1Q923P0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col20a1Q923P0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col20a1Q923P0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col20a1Q923P0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Col20a1Q923P0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.3■■□□□ 1.8
Col20a1Q923P0 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.3■■□□□ 1.8
Col20a1Q923P0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.3■■□□□ 1.8
Col20a1Q923P0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.3■■□□□ 1.8
Col20a1Q923P0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col20a1Q923P0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col20a1Q923P0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Col20a1Q923P0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col20a1Q923P0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col20a1Q923P0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Col20a1Q923P0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col20a1Q923P0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col20a1Q923P0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
Col20a1Q923P0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Col20a1Q923P0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col20a1Q923P0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col20a1Q923P0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Col20a1Q923P0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Col20a1Q923P0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col20a1Q923P0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.27■■□□□ 1.8
Col20a1Q923P0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col20a1Q923P0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Col20a1Q923P0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
Col20a1Q923P0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col20a1Q923P0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col20a1Q923P0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col20a1Q923P0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Col20a1Q923P0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col20a1Q923P0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.24■■□□□ 1.79
Col20a1Q923P0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col20a1Q923P0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col20a1Q923P0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col20a1Q923P0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col20a1Q923P0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col20a1Q923P0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col20a1Q923P0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col20a1Q923P0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col20a1Q923P0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.2■■□□□ 1.78
Col20a1Q923P0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col20a1Q923P0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col20a1Q923P0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col20a1Q923P0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col20a1Q923P0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col20a1Q923P0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col20a1Q923P0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col20a1Q923P0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.18■■□□□ 1.78
Col20a1Q923P0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col20a1Q923P0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col20a1Q923P0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col20a1Q923P0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.17■■□□□ 1.78
Col20a1Q923P0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms