Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm45364-201ENSMUST00000210883 159 ntBASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb4Q91XZ6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb4Q91XZ6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhb4Q91XZ6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb4Q91XZ6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdhb4Q91XZ6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Pcdhb4Q91XZ6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb4Q91XZ6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.83■■□□□ 1.09
Pcdhb4Q91XZ6 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.83■■□□□ 1.09
Pcdhb4Q91XZ6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.83■■□□□ 1.08
Pcdhb4Q91XZ6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb4Q91XZ6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb4Q91XZ6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pcdhb4Q91XZ6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb4Q91XZ6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb4Q91XZ6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb4Q91XZ6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb4Q91XZ6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb4Q91XZ6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhb4Q91XZ6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.8■■□□□ 1.08
Pcdhb4Q91XZ6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb4Q91XZ6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb4Q91XZ6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb4Q91XZ6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb4Q91XZ6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb4Q91XZ6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb4Q91XZ6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb4Q91XZ6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb4Q91XZ6 Terc-201ENSMUST00000082862 423 ntBASIC21.77■■□□□ 1.08
Pcdhb4Q91XZ6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb4Q91XZ6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb4Q91XZ6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb4Q91XZ6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.76■■□□□ 1.07
Pcdhb4Q91XZ6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb4Q91XZ6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb4Q91XZ6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb4Q91XZ6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb4Q91XZ6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb4Q91XZ6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb4Q91XZ6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb4Q91XZ6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb4Q91XZ6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb4Q91XZ6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb4Q91XZ6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
Pcdhb4Q91XZ6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb4Q91XZ6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb4Q91XZ6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb4Q91XZ6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.72■■□□□ 1.07
Pcdhb4Q91XZ6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb4Q91XZ6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Pcdhb4Q91XZ6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb4Q91XZ6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb4Q91XZ6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb4Q91XZ6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb4Q91XZ6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb4Q91XZ6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhb4Q91XZ6 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms