Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.03■□□□□ 0.48
Rab40cQ8VHQ4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rab40cQ8VHQ4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40cQ8VHQ4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40cQ8VHQ4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.03■□□□□ 0.48
Rab40cQ8VHQ4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40cQ8VHQ4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40cQ8VHQ4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40cQ8VHQ4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rab40cQ8VHQ4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40cQ8VHQ4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rab40cQ8VHQ4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab40cQ8VHQ4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab40cQ8VHQ4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab40cQ8VHQ4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.01■□□□□ 0.47
Rab40cQ8VHQ4 Gm37136-201ENSMUST00000194368 194 ntBASIC18.01■□□□□ 0.47
Rab40cQ8VHQ4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rab40cQ8VHQ4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab40cQ8VHQ4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40cQ8VHQ4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rab40cQ8VHQ4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40cQ8VHQ4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40cQ8VHQ4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40cQ8VHQ4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab40cQ8VHQ4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab40cQ8VHQ4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rab40cQ8VHQ4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab40cQ8VHQ4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab40cQ8VHQ4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.99■□□□□ 0.47
Rab40cQ8VHQ4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40cQ8VHQ4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.97■□□□□ 0.47
Rab40cQ8VHQ4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rab40cQ8VHQ4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab40cQ8VHQ4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab40cQ8VHQ4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40cQ8VHQ4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rab40cQ8VHQ4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40cQ8VHQ4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40cQ8VHQ4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40cQ8VHQ4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40cQ8VHQ4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40cQ8VHQ4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40cQ8VHQ4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40cQ8VHQ4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40cQ8VHQ4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rab40cQ8VHQ4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40cQ8VHQ4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40cQ8VHQ4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40cQ8VHQ4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.91■□□□□ 0.46
Rab40cQ8VHQ4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40cQ8VHQ4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.9■□□□□ 0.46
Rab40cQ8VHQ4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rab40cQ8VHQ4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40cQ8VHQ4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40cQ8VHQ4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rab40cQ8VHQ4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rab40cQ8VHQ4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rab40cQ8VHQ4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40cQ8VHQ4 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.88■□□□□ 0.45
Rab40cQ8VHQ4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms