Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab40bQ8VHP8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab40bQ8VHP8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab40bQ8VHP8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.87■□□□□ 0.77
Rab40bQ8VHP8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab40bQ8VHP8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab40bQ8VHP8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab40bQ8VHP8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.86■□□□□ 0.77
Rab40bQ8VHP8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab40bQ8VHP8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.85■□□□□ 0.77
Rab40bQ8VHP8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab40bQ8VHP8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rab40bQ8VHP8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab40bQ8VHP8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab40bQ8VHP8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab40bQ8VHP8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rab40bQ8VHP8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab40bQ8VHP8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab40bQ8VHP8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab40bQ8VHP8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab40bQ8VHP8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab40bQ8VHP8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.82■□□□□ 0.76
Rab40bQ8VHP8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab40bQ8VHP8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab40bQ8VHP8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab40bQ8VHP8 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.81■□□□□ 0.76
Rab40bQ8VHP8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rab40bQ8VHP8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab40bQ8VHP8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab40bQ8VHP8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab40bQ8VHP8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab40bQ8VHP8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab40bQ8VHP8 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.78■□□□□ 0.76
Rab40bQ8VHP8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab40bQ8VHP8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab40bQ8VHP8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.77■□□□□ 0.76
Rab40bQ8VHP8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.77■□□□□ 0.76
Rab40bQ8VHP8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab40bQ8VHP8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab40bQ8VHP8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab40bQ8VHP8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Rab40bQ8VHP8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rab40bQ8VHP8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab40bQ8VHP8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab40bQ8VHP8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab40bQ8VHP8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.74■□□□□ 0.75
Rab40bQ8VHP8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab40bQ8VHP8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab40bQ8VHP8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab40bQ8VHP8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab40bQ8VHP8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab40bQ8VHP8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Gm22567-201ENSMUST00000175542 342 ntBASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab40bQ8VHP8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms